Yersinia canariae: F0T03_11680
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Entry
F0T03_11680 CDS
T06446
Symbol
fadD
Name
(GenBank) long-chain-fatty-acid--CoA ligase FadD
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
yca
Yersinia canariae
Pathway
yca00061
Fatty acid biosynthesis
yca00071
Fatty acid degradation
yca01100
Metabolic pathways
yca01212
Fatty acid metabolism
yca02024
Quorum sensing
yca04146
Peroxisome
Module
yca_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
F0T03_11680 (fadD)
00071 Fatty acid degradation
F0T03_11680 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
F0T03_11680 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
F0T03_11680 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
yca01004
]
F0T03_11680 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yca04147
]
F0T03_11680 (fadD)
Enzymes [BR:
yca01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
F0T03_11680 (fadD)
Lipid biosynthesis proteins [BR:
yca01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
F0T03_11680 (fadD)
Exosome [BR:
yca04147
]
Exosomal proteins
Exosomal proteins of breast milk
F0T03_11680 (fadD)
Exosomal proteins of breast cancer cells
F0T03_11680 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
QHB32762
UniProt:
A0A857F194
LinkDB
All DBs
Position
complement(2504285..2505979)
Genome browser
AA seq
564 aa
AA seq
DB search
MEKVWLKRYPADVPAEIDPDRYSSLVEMFENAALRYADQPAFINMGEVMTFRKLEERSRA
FAAYLQQGLGLQKGDRVALMMPNLLQYPIALFGILRAGMVVVNVNPLYTPRELEHQLNDS
GAAAIVIVSNFAHTLEKIVFKTQVKHVILTRMGDQLSTAKGTLVNFVVKYIKRLVPKYYL
PDAISFRTALQKGRRMQYVKPDVINTDMAFLQYTGGTTGVAKGAMLTHRNMQSNLEQAKA
AYAPLLQPGHELVVTALPLYHIFALTMNCLLFIELGGRSLLITNPRDISGMVKELSRYPF
TAMTGVNTLFNALLNNEEFTKLDFSTLRLSVGGGMPVQKAVADKWEKLTGKHLLEGYGLT
ECSPLVTGNPYDLKHYSGSIGLPVPSTDVRLLDDEGNEVALGEPGELWVRGPQVMLGYWQ
RPEATDEVLKEGWLATGDIATLDEQGFLRIVDRKKDMILVSGFNVYPNEIEEVVALHAKV
LESAAVGVPNEVSGETVKLFVVKKDASLTQEELLTHCRRYLTGYKVPKIVEFRDELPKSN
VGKILRRELRDEQIKAKTSEQNAA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
ttggaaaaagtatggctaaagcgatatccggcagatgttcccgcagagattgacccggat
cgctattcttctttggtggaaatgtttgagaacgcagcattgcgttatgcggaccaacct
gcgtttatcaatatgggggaggtgatgaccttccgtaagctggaagagcgtagccgtgct
ttcgccgcctatttacagcaaggtttggggttgcaaaaaggcgaccgcgtagcattaatg
atgcccaacctgctgcaatatcctattgccttgtttggtattctacgtgccggtatggtt
gtggtgaatgttaacccactgtataccccgcgagaattggagcatcagctcaatgatagt
ggggctgcggccattgttatcgtttccaactttgcccacacactggaaaaaatcgttttt
aaaacgcaagttaaacacgtcattttgacccgcatgggcgaccaattgtcgactgccaaa
ggcacactggtcaatttcgtcgtgaaatacatcaagcggctggtgccgaaatattattta
cctgatgccatttcattccgcacggcattacaaaaaggccggcgcatgcaatatgtgaag
ccggatgttatcaatacggatatggcattcttgcaatataccggcggcaccaccggcgtg
gcgaaaggggcaatgctcactcaccgaaatatgcagtcgaatctggaacaggctaaggcg
gcttatgcgccattgttacaaccgggccatgaattggtggtgacggcacttccgctctat
catatttttgctttgaccatgaactgcctgttatttatcgagttgggggggcgcagttta
ttaatcactaacccgcgtgatatttcaggaatggtgaaagagctaagccgttatcctttc
acggcgatgacgggagtgaatacgttatttaatgcactgttaaataatgaagaattcacc
aagttagacttttcaacattacggctctcagtcggcggcggtatgccagtacaaaaggca
gtggccgataaatgggaaaaactgaccggcaagcatttgctggaaggctatggtttgacc
gagtgttcgcctctagtcaccggcaacccttatgatttgaaacattacagtggcagtatt
ggcctccccgtcccttcaactgatgttcgactgcttgatgatgaggggaacgaagttgcg
ctgggtgagccgggcgaactgtgggtgcgagggccacaagttatgttaggctattggcag
cggcccgaggcgaccgatgaagtgctgaaagagggttggctggcaacgggcgatatcgcg
acgctagacgagcaaggcttcttgcgaatcgttgatcgtaaaaaggatatgattctggtt
tcgggttttaacgtctacccaaatgagattgaagaagtggtggcattacatgcgaaagtg
ctggagtctgccgcggtaggagtgcctaatgaggtctctggtgagacagtaaaactgttt
gtcgtgaaaaaagatgcctcattgacgcaggaagagttgctaacccattgccgccgctac
ctcactgggtataaagtaccgaaaatagtagagttccgtgacgaattgccgaaatcaaac
gttggcaaaattttgcgcagggaactgcgtgacgagcagattaaagctaagaccagcgag
caaaacgcagcttag
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