Yersinia canariae: F0T03_12150
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Entry
F0T03_12150 CDS
T06446
Name
(GenBank) TetR/AcrR family transcriptional regulator
KO
K18294
TetR/AcrR family transcriptional regulator, mexCD-oprJ operon repressor
Organism
yca
Yersinia canariae
Module
yca_M00639
Multidrug resistance, efflux pump MexCD-OprJ
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yca03000
]
F0T03_12150
09183 Protein families: signaling and cellular processes
01504 Antimicrobial resistance genes [BR:
yca01504
]
F0T03_12150
Transcription factors [BR:
yca03000
]
Prokaryotic type
Helix-turn-helix
TetR/AcrR family
F0T03_12150
Antimicrobial resistance genes [BR:
yca01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexCD-OprJ [MD:
M00639
]
F0T03_12150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TetR_N
HTH_24
HTH_7
HTH_23
HTH_AsnC-type
HTH_11
HTH_Tnp_1_2
HTH_IclR
HTH_22
TrmB
HTH_20
HTH_17
CENP-B_N
HTH_Tnp_1
Sigma70_r4
HTH_6
Motif
Other DBs
NCBI-ProteinID:
QHB32847
UniProt:
A0A857EZI4
LinkDB
All DBs
Position
complement(2588992..2589558)
Genome browser
AA seq
188 aa
AA seq
DB search
MGYFHIMSLDNDRLMIGLAAILAKSPNATYLEIAERIGVSRATLYRFCGNREELIHRILK
YAATKLTENIQAIRLEDGHPIEALNRLLESELKDRPLHSFLSEFWSSSHELNSELLPTVL
TYEKVLDNFFLRGQREGVFRIDIPAAVLNENLTWLLIGLMDAERRGRIARASVLETAKLL
FLEGAEPH
NT seq
567 nt
NT seq
+upstream
nt +downstream
nt
atgggatattttcatattatgagtttagataatgataggttaatgatagggttagctgcg
atcttggcaaaatcgccaaatgcaacttacctagaaatcgctgagaggattggtgttagt
cgcgcgacactttaccgtttttgcggcaatcgtgaagaactgatacatcgaattcttaaa
tatgcggctacaaaactgacagaaaatattcaggctatacgacttgaagatgggcaccct
attgaagcacttaatcgcttgttagaaagtgaattaaaagatcggccacttcactcattt
ctttccgaattctggtcaagttctcatgaactaaattctgagttgttacctactgtccta
acgtatgagaaagtgttagataatttttttctgaggggccaacgtgagggagtattccgt
atagatatccccgcggctgtacttaatgaaaacctcacttggttacttattggtttaatg
gatgcggagcgacgaggtagaatagccagagcaagtgtattagaaacagctaaattatta
tttcttgaaggagcggagccacattga
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