Yersinia canariae: F0T03_13960
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Entry
F0T03_13960 CDS
T06446
Symbol
pocR
Name
(GenBank) regulatory protein PocR
KO
K27259
AraC family transcriptional regulator, pdu and cob operon regulator
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yca03000
]
F0T03_13960 (pocR)
Transcription factors [BR:
yca03000
]
Prokaryotic type
Helix-turn-helix
AraC family
F0T03_13960 (pocR)
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GFIT
Motif
Pfam:
PocR
HTH_AraC
HTH_18
Motif
Other DBs
NCBI-ProteinID:
QHB33156
UniProt:
A0A857F0D1
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Position
complement(2979959..2980861)
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AA seq
300 aa
AA seq
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MISASSLNSELINKIAQDFAQATGLAVVVVNIHGEEISDLFNFTPFCQLMRQDPVNHLRC
RMSDRCGGLEASKSNEPCIYRCHAGLTDFSIPLVIAGHLVGFVLCGQVRLHSDVYLIDIL
NVDNHWQQNPVLMDEFHNVPIMDFSRVIASADLLKLIVENCLKKHLNFVVINDNMGSKEP
GRIRPVHPHDSKMKKALRYIDTHLSEELRLEEVAAKVYLSPYYFSKLFKKYQGIGFNAWV
NQQRMANAREMLQHSDWSIASIAKNLGFSQTSYFCKVFRQTYNVTPQVFRSLSSERSEME
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
atgatttctgccagttctctaaactcagagctcataaataaaatcgcgcaggattttgct
caggcaaccgggctggctgtagtcgtggtgaatattcacggcgaagaaatttctgatcta
tttaattttacgccattttgtcaattgatgcgccaagacccggttaaccaccttcgttgc
cgaatgagtgatcgttgtggtggccttgaggcctcaaaatctaatgaaccttgtatttat
cgctgccatgccgggctaacggatttctctatcccgctggttatagcaggtcatttggtc
gggtttgttctatgtggccaggtgcggctacactcggatgtttatctgattgatattctt
aatgttgataatcactggcaacagaatccggtactgatggatgaattccacaatgtgccc
attatggatttttctcgcgtgattgcttcggcagatttactgaagctgattgtggagaat
tgcctcaaaaagcatcttaattttgtggtgatcaatgacaatatgggcagcaaagaaccg
ggtaggatacgtccggttcacccccacgacagcaaaatgaagaaagccttgcgctacatc
gatacgcatttatcggaagaattgcgactggaagaagtggctgcaaaggtatatctcagc
ccttactacttcagcaaattgtttaaaaaatatcagggcatcgggtttaatgcctgggtc
aatcagcaacggatggccaatgccagagaaatgttgcaacacagtgactggagcattgcc
agtattgccaagaatctgggtttttcccagacaagctatttctgcaaagtgttccgccaa
acttacaacgtgacaccgcaggtatttcgctcactttcttctgaacgcagcgaaatggaa
tga
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