Yersinia canariae: F0T03_15100
Help
Entry
F0T03_15100 CDS
T06446
Symbol
uvrB
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
yca
Yersinia canariae
Pathway
yca03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
F0T03_15100 (uvrB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_15100 (uvrB)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
F0T03_15100 (uvrB)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
F0T03_15100 (uvrB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
AAA_30
UB2H
DUF87
SBDS_domain_II
AAA_22
Motif
Other DBs
NCBI-ProteinID:
QHB33355
UniProt:
A0A857F2W8
LinkDB
All DBs
Position
complement(3209704..3211716)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKLFKLHSEFKPAGDQPEAIRKLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDSSVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLSELQ
YSRNDQVFQRGTFRVRGEVIDIFPAESDEWALRVELFDEEVERLSIFDPLTGQLQHEVPR
FTVYPKTHYVTPRERILQAMEDIKVELAERRQVLLANNKLIEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPADGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYELEKSGGDVIDQVVRPTGLLD
PLIEVRPVTTQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLEEHGARVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITASMEKAIGETERRRAKQQAYNEERGIIPQGLNKKVGDILQLG
QPSTRGKGKGRGGKVADTHDYQSLAPKALDQKIRELEAKMYTHAQNLEFEQAAELRDQVH
QLRQQFIAIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaattattcaaactacattctgagtttaaaccagcaggcgatcagcctgaagcc
atccgtaagttggaggaggggctggagaatgggttggcccatcagacgttgttgggggtg
acgggctcgggtaaaacctttacggttgctaatgttattgctgacctgaatcggcccacg
atggtgttagcgcccaataaaacattggcagcgcagctttatggcgagatgaaagagttc
tttcccgagaatgcggtggagtatttcgtctcctattatgattattatcaacctgaagct
tatgttcccagctctgatacctttatcgagaaagattcctctgtaaacgagcatatcgag
caaatgcggctctcggcgactaaagccctactggagcggcgcgatgtcgtggtggtagcc
tcggtctccgctatttatggtttgggtgaccccgatttatacctgaaaatgatgctgcat
ttgaccaagggcatgataattgatcagcgctccattttgcggcgcttgtcagaattacaa
tatagccgcaatgatcaggtgttccagcgcggcactttccgagtccgtggcgaggttatc
gacatcttcccggcggaatctgacgaatgggcattgcgggttgaattgtttgatgaggaa
gttgagcggttatctatatttgatccgctaactggccagctacagcacgaggttccacgt
tttacggtctatcctaaaacccactacgttaccccaagggagcgtattttacaggcaatg
gaagacatcaaagttgaactggctgagcggcgtcaagtgctattagccaacaacaaattg
attgaagaacaacggattacgcaacgaacgcagtttgatctggaaatgatgaatgagctg
ggttactgctctggtattgaaaactactcccgttatctttctggacgagggccgggtgag
ccaccgccaaccctgtttgattacctaccggcagacggcttgctgattgtggatgaatcc
cacgtcaccattccacaaattggcggaatgtataaaggggaccgctcacggaaagaaaca
ctggtggaatatggcttccggctgccatcggcactggataaccgcccaatgcgctttgaa
gagtttgaggcgctggcaccacaaaccatttatgtttccgcgaccccaggcaagtatgag
ctggagaaatccggcggtgatgttatcgaccaagttgtgcgcccaacaggcttgctcgac
ccacttattgaagttcgccccgtcacaacgcaggtggatgatttactgtcagaaatccgt
atccgagccgccataaacgaacgggtattggtgactacgctaaccaaaaggatggcggaa
gatttaaccgaatatctggaagagcacggcgcacgggtgcgttacttgcattcagatatt
gacactgttgagcgtgttgaaattatccgtgacttgcgtttgggtgagtttgatgtgctg
gtgggcatcaacttactgcgagaagggctggatatgccggaggtttctctggttgccatc
cttgatgccgataaagaaggtttcctgcgttctgagcgctccttaatccagacgattggc
cgcgcagcacgtaacctcaatggtaaggctattctttatggcgatagaattacggcttca
atggaaaaagcgattggtgaaaccgagcggcgtcgggctaagcagcaagcttacaacgaa
gagcgcggtattatccctcaggggcttaataagaaggtcggcgatattctgcaattaggc
cagccttctacccggggtaaagggaaagggcggggcggtaaagtggctgatacccatgat
taccaatctttggcaccgaaagcgcttgaccagaaaatccgtgagttggaagcgaagatg
tacacacacgcgcaaaatcttgagttcgaacaagcggcagaattgcgcgatcaggtgcat
cagttgcgccagcaattcattgccatatcttaa
DBGET
integrated database retrieval system
