Yersinia canariae: F0T03_16500
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Entry
F0T03_16500 CDS
T06446
Symbol
sbcD
Name
(GenBank) exonuclease subunit SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_16500 (sbcD)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0T03_16500 (sbcD)
Archaeal homologous recombinant proteins
F0T03_16500 (sbcD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
Motif
Other DBs
NCBI-ProteinID:
QHB33599
UniProt:
A0A857F4C1
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All DBs
Position
3503155..3504393
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQHFFTKSRAPEHQAFLHWLIEQIEENQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVELQATNCQLIVLGGNHDSVSTLNESRGLLSYLNTTVISCANNNLDQQVIILK
DHQGQPAALLCAIPFLRPRDLVTSQAGESGEQKQLALQEAIAAHYQALYQRALERRTELG
LPLPIIATGHLTTVGVTTTDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSSEKSVYLVEFAQQALTSVTPLFIPQFQPMKLIKGDLAQIEQQLA
EFANHQGLPVWLDIEVATQDYLTDIQRRIQALAAELPVEVVLLRRSKEQRNNSIERQEKE
TLNELSVTDVFERRLAQEADLAEPRQERMRQMFNQVVVDITLGKDAAEEQPA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcacacctctgactggcatttaggccagcatttctttaccaaaagtcgt
gcgcctgaacatcaggcttttttacactggcttattgaacagattgaagaaaatcaggtt
gatgcgctgattgttgcaggggatatttttgatactggctccccacccagctatgcccgt
gagctgtataaccgttttgtggtcgaactccaggcaacaaattgccagttgattgttttg
gggggaaatcatgattcagtatcaacgctgaatgaatctcggggtttgctttcttatttg
aataccacagtcatttcctgcgccaataacaatctggatcaacaagttattatactgaaa
gaccatcagggccagccagcggccttgctttgtgctattccttttttgcgaccgcgcgac
ttagttaccagtcaggccggtgagtccggtgagcaaaaacaactggcattacaagaagca
attgccgctcactatcaggcgctctatcagcgagcgctagagcggcgcacggaactgggg
ctgcccttgcctattatcgccactgggcatttgaccacagtcggggtcaccaccacagat
tcggtacgtgatatttatatcggcacactggatgctttcccggcacaagctttcccccca
gcagattatattgctctgggtcatatccatcgcgctcagcaagttgcgaaaaccgagcat
atccgttatagcggctcaccaatcgctttaagttttgatgaattgagcagcgagaaaagt
gtttatctggttgaatttgctcagcaagctttaacatcagtgaccccactcttcatccca
caatttcaaccaatgaagttaatcaaaggcgatttggcgcaaatagagcaacagttagcc
gaatttgctaaccatcagggcttaccggtatggctagatatagaagtcgcaacgcaagac
tatctcactgatattcaaagacgaatccaggcattggccgcggaacttccggtggaagtg
gtgctattgcggcgcagtaaagaacagcgcaataacagcattgaacgccaggaaaaagaa
acactcaatgagctgagtgttacagatgtatttgagcgcagactggcgcaggaagcggat
ttagccgagccacgccaagagcgcatgcgccaaatgttcaatcaagtggtggtggacatc
acactaggtaaagatgctgcagaggagcaacctgcatga
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