Yersinia canariae: F0T03_16505
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Entry
F0T03_16505 CDS
T06446
Name
(GenBank) AAA family ATPase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yca
Yersinia canariae
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_16505
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
F0T03_16505
Archaeal homologous recombinant proteins
F0T03_16505
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
cobW
AAA_21
SMC_N
nSTAND3
NTPase_1
GTP_EFTU
Motif
Other DBs
NCBI-ProteinID:
QHB33600
UniProt:
A0A857F257
LinkDB
All DBs
Position
3504390..3508079
Genome browser
AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGTSYRAFWSQRRAKNSPEGNLQAPKVELALCED
GKILADKVRDKLDMIAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSAYVFEQHKQAKITLDALHQRASGIELLNEEQRVALAQQLDTLGEQEKQLTSEQRI
NQNQINWLTLWQQQQKNVLEYQQQQQLIEQEYQQVQPELQQLARSEPAEKLRPLLHERSR
SLQDLQQIQLRVTTLTEQQKQLQTQLTPLAHALEQANLARQQQATRQHEQETLIEQKVVP
LDNLIAQQQHALMLLATQVQQLRSKEQQGRQQLELNEQQLKQTYQRLQQLTEYTHQYAHH
QHWEKNLPLWREQFRQLQIQQKQLVESEQQLQQEVTLLTSLQQQIATLNEQDKQQQTALA
QANSQVGGIQQQLSVLEQQQPLAQLHQQLSELQQQRPVRQQLAALSPLAQQVQALHDKQQ
QQLVGQQQQLKLLEQQLAEKRQLYKQQKQHLTDLETLLEREKQIVRLEAERAKLQPGEAC
PLCGALDHPAITEYQLVKPSETTLRVEELRLQVEQLFTVGTELRTQVANGQQQQLRLEQE
LQHSQQQLADYQQRWQTLTQPLALTFALNESAVLATWLEQQEQSEQTCQLKLAEYERLNQ
QYQQAKDILAQAEQQQQQHQQQLAFVILRQQDAQQSHQKLLAQHQHQQAEWAKTRQDFSH
TLAELSLSLPDTDQQQSWLSLREEENQHWHQYQKEQQQLALGQKALETQIENERRHLQEC
IDQLSTLTQQHQQAETLLQQQKQQRQTLFGDIQVIEARQLLRQQQQQVELAQQNASQALQ
QAQSQLNLMSGELTGLKQQQQQNQQRATEAQAELQLALASSEFEDEDALTTALLSEEERQ
RLQQLKQQLSERQQQANIRQQQASEALEQLIHSCPAGVSQTSELAILQQQSEQILAQLKA
NTLRQGELRNQLESDTVRRGNQHSLFEQIKQSQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGVSRLDNIFRVNQD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagtctacgcttgaaaaatattaattctctacagggtgaatggaagata
gatttcaccgcagaaccctttgccagcaacgggttattcgctatcaccggccctacaggg
gcgggcaaaactaccctgcttgatgccatctgtctcgcgctataccaccaaactccgcgt
ttgaatgtcaccccgagccaaaacgaactgatgacccgccatactgcggagtcgctcgct
gaagttgaattcgaggtaaaaggcacgagttaccgcgcgttctggagccagcgtcgtgct
aaaaatagccctgaagggaatctacaagcccctaaagttgagctagcgctgtgtgaagat
ggcaaaatcctggctgataaagtgcgtgataagcttgatatgattgctgcaatcaccgga
ctggattttggccgtttcaccaaatcgatgatgctatcccaggggcaattcgcagctttc
ctcaatgccgatgctaatgaccgcgcggaattattagaagaattaaccggcaccgatatc
tatgggcggttatctgcatatgtctttgagcagcataagcaggccaagatcacgttggat
gcattgcaccaacgcgccagtggtattgagcttcttaatgaagagcagcgtgtagctttg
gcgcaacaattagatacgctcggtgaacaagaaaagcagctcacctcagaacagcgcata
aatcaaaaccaaataaattggctcaccctttggcagcaacagcaaaagaatgtacttgaa
tatcaacaacaacagcaactcattgagcaagagtatcaacaggtgcagcccgaactgcaa
cagcttgcccgtagtgagcccgcagaaaagttacgccctttattacatgagcgctcacgt
agcctacaagatttacagcagatacaactgcgtgtcaccacactgacagaacaacaaaaa
caacttcagacacaactcacgccactggcccacgccttggaacaagccaatcttgcacgt
caacaacaagcaaccaggcagcatgagcaagaaacactgatcgagcaaaaagtcgttccg
ctggataaccttattgctcaacagcagcacgcattaatgctacttgccacacaagtacaa
cagttgcgaagcaaggagcagcaaggtagacaacaacttgagttaaacgaacaacagcta
aagcaaacctaccagcgcctgcaacaactgactgagtatacccaccagtatgctcatcat
cagcactgggaaaaaaatctgcctttgtggcgagagcaatttcgtcaattacaaattcaa
caaaaacaattagttgaaagcgagcaacaattacagcaagaagtcacattgctcacttcc
ttgcaacagcaaatcgccacactgaatgaacaagataaacaacagcaaaccgcattagcc
caagccaactctcaagttggtggtattcagcaacaattatcagtacttgagcaacaacag
cctttagcacaattacaccaacaactgtccgaactccagcaacagcgcccagtccgacaa
caactagccgcgttatcgccgctggcacaacaagtacaagcgctgcatgataaacagcag
caacaattagtgggccaacaacagcagttaaaactcctcgaacagcagttggcagagaaa
cgtcagttatataaacaacaaaaacaacatctgacggatcttgaaactttgctggaacgc
gaaaaacaaatagtccggctagaagctgagagagccaaactgcaaccgggagaggcctgc
ccattatgtggggcattggatcacccggctattactgagtatcaattagtaaaaccctca
gaaacgaccctgcgggttgaggaactgcgacttcaggttgagcagcttttcacggtggga
acagaattacgtactcaggtagcaaatgggcagcaacagcagttgcgcctggaacaagag
ttacagcacagccagcaacaattggcagattatcaacagcgatggcaaacactcactcag
ccattggcgctgacatttgctttgaatgaatctgcggtcttagcaacctggttagagcaa
caggaacaatcagaacaaacctgtcagctaaaactggctgaatatgaaaggctgaatcag
caatatcaacaagctaaagatattctggctcaggcagaacaacagcagcaacagcatcag
cagcaattggcatttgttattctgcgccagcaagatgcccagcagtctcaccaaaaactg
ctagcacaacatcaacatcaacaagctgaatgggcaaaaacgcgtcaagattttagccat
accctggcggaattatcactctcccttcctgacacagaccaacaacagagctggctatca
ctgcgggaagaggaaaatcagcactggcaccagtaccagaaagagcagcagcagttagct
ctaggccaaaaagcgctggaaacgcagattgaaaatgaacgtcgccatttacaagaatgt
attgatcagttgtctacactcacccaacagcatcaacaagctgaaaccttgttacaacaa
caaaaacaacaacgccagacactgtttggtgacattcaggttatcgaggcacgccagtta
ttacgccaacagcagcaacaagtggagctggctcaacagaatgcatcacaagccctgcaa
caggcacaatctcaacttaacttgatgtccggtgagttaaccgggctgaaacagcaacaa
cagcaaaatcagcaacgcgctaccgaggcccaagctgaattacaacttgcgttggcaagc
agtgaattcgaggatgaggatgcattaaccaccgcattactcagtgaagaagaaaggcaa
cgtttgcagcaattgaaacaacaattgagcgagcggcaacaacaagcaaacatccgccag
cagcaagccagtgaggcgctagaacaactgatacactcttgccccgctggggtcagccaa
acatccgaattagcaatattacaacagcaatcagagcaaatactggcccaactgaaagcc
aataccttgcgacaaggcgaattacgcaatcagttagaaagcgatactgttcgccgtggc
aaccaacattcgctatttgagcaaattaaacaaagtcagcaacaatatgatgactggagc
tatctcaatcatttaatcggctccaaagaaggtgataaattccgcaagtttgcacaaggt
ctgacactcgatcatttagtctatctggcaaataatcaactcagtcggctgcatggtcgc
tatcaattacagcgtaaaaccagtgatgcgctggagctacaagtggtggatacctggcaa
gcagatgctatccgtgatacccgcacactatcaggaggagaaagtttcttagtcagttta
gccctggccttggcgctatcagatttggtcagccataaaaccagtattgactccctattc
cttgatgaaggctttggcactctggatgcagagacactggatactgcactggatgccctt
gatagcctgaatgcatcgggtaaaactattggggttatcagccatgtagaagcaatgaaa
gaccgaattccagtgcaaattaaagttaaaaaagtcaatggattgggggttagccgctta
gataatatcttccgggtcaatcaagactaa
DBGET
integrated database retrieval system
