Yersinia canariae: F0T03_16965
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Entry
F0T03_16965 CDS
T06446
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yca
Yersinia canariae
Pathway
yca03030
DNA replication
yca03430
Mismatch repair
yca03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yca00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
F0T03_16965 (dnaE)
03430 Mismatch repair
F0T03_16965 (dnaE)
03440 Homologous recombination
F0T03_16965 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yca03032
]
F0T03_16965 (dnaE)
03400 DNA repair and recombination proteins [BR:
yca03400
]
F0T03_16965 (dnaE)
Enzymes [BR:
yca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
F0T03_16965 (dnaE)
DNA replication proteins [BR:
yca03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
F0T03_16965 (dnaE)
DNA repair and recombination proteins [BR:
yca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
F0T03_16965 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
MutS_II
Motif
Other DBs
NCBI-ProteinID:
QHB33683
UniProt:
A0A857F212
LinkDB
All DBs
Position
complement(3617004..3620486)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHGA
GVKPIIGADFYVQSEILGDELAHLTVLARNNEGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGKFILRGNHTQVDQCLEFYQEHFPDSYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALANSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVEKSKQGL
EERLELLFPDSEIRAQKRPAYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLAFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPLDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDIAFIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKSQGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAMLEARKEGGYFKELFDLCARVDTKKLNRRILEKLIMSGAFDRLGPHRAALMS
SLGEALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYANVPPWQEQIVLDGERETLGLY
LTGHPITQYLKEIERYAGGLRLKDMHPTDRGKMTMAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgtccacctacgtgttcacagcgattattccatgatcgatgga
ttagccaagattgggcccttggtgaagagagctgccgcattaggcatgcccgctctggcc
attaccgattttactaacctgtgcggtttggtaaaattttacggtagcgctcatggtgct
ggggtcaaacccatcattggcgcagatttctatgtgcaaagtgaaatcttgggtgatgaa
ttagctcacctgactgtcctggctcgcaataatgaaggttatcaaaaccttactttactt
atatctgaagcttatcaacgcggatatggtgctgctggccctatcattgaccgtgactgg
ctgattaaacataaagaagggctgattctgctatccggtggtcggatgggggatgttggc
aagtttattctgcgtggtaatcatactcaggttgatcagtgtcttgaattttatcaagaa
catttccctgacagttattatctagaattgattcgcaccggtcggccggatgaagaaaac
tatctgcatgccgctgtagcattggcaaccgaacggggtttgcccgtggtggcgaccaat
gatgtgcgttttattgatgaatcagattttgatgcccacgagattcgtgttgccattcac
gacggttttacacttgttgaccctaagcggcctaaaaattatagccctcagcagtttatg
cgtgatgaagagcagatgtgtgagctgttcgcggatattcctgaggcactggccaacagt
gttgaaatcgccaaacgttgtaatgtgactatccggcttggggaatatttcctaccgcaa
ttcccaaccggggatatgagcaccgaagatttcctggttgaaaagtctaaacaaggttta
gaagagcgactggaactgttattccctgattctgaaatccgggcgcaaaaacggccagcc
tatgatgaacgtctggaaatagaactaaaagttatcaaccagatgggcttcccgggctac
ttcttgatagtaatggaatttatccagtggtcaaaagataacggggtgccggtaggacca
gggcgtggttctggtgcaggttctctggttgcttacgcactgaagattaccgatcttgat
ccgctggcatttgatctgctgtttgaacgttttctaaacccagaacgtgtatcaatgccc
gacttcgacgtcgacttttgcatggagaagcgcgatctggtgattgaacacgttgcggat
atgtatggtcgtgatgcggtttctcagataattacctttgggactatggcggccaaagcg
gttatccgcgacgtgggtcgtgtcttgggtcacccctacggttttgtcgatcggatttcg
aaattagtcccgctagatcccggtatgacgctggagaaagctttcgctgcggaaccgcaa
ctgcctgaaatctatgaggcagatgaagaggtcagggcgctaattgatatggcgcgcaag
ttggaaggggtaacacgtaacgccggtaaacatgccggtggggtggttatcgcgccaaca
aaaattaccgatttcgcgccgctatactgcgacgcggaaggcaataacccggttacccaa
ttcgataagaatgatgtggaatatgccgggctggtaaagttcgacttccttggtttgcga
acacttactatcattaactgggcgttagaaatgataaacgctcggcgcgcgaaaaccgga
ttagagccgattgatattgcgtttattccgctggatgataaaaaaagcttcgatatgctg
caacgttctgaaacgacagcagtattccagcttgaatccagaggtatgaaagaccttatc
aagcggctgaaacctgactgcttcgaagatatgattgcattggtggcgctgttccgccca
ggcccgttgcaatcggggatggttgataactttattgaccgtaaacacggccgtgaagcg
atatcttatcctgatattgaatggcagcatgaatctctaaaaccggtgcttgagccaact
tatggcatcatcttgtatcaagaacaggttatgcagattgctcaggttctgtctggttat
tcactcggcggcgcggatatgttgcggcgtgcgatgggtaagaagaacccggcagagatg
gcaaaacagcgctctgtatttgaagatggtgcgaaaagccaaggtgttgacggtgaattg
gcgattaagatttttgacctggtagagaaatttgctggttacggttttaacaagtcacac
tccgcagcttatgctttagtctcttaccaaactttgtggttgaaagcacattacccggct
gagtttatggcggcggtaatgacggccgatatggacaacaccgataaagtggttgggctg
gttgatgaatgctggcgtatggggctgaaaattctgcctcctgatatcaacagcggcctg
tatcatttccatgtaaatgatgaaggtgaaattgtttatggtatcggcgccatcaagggt
gttggcgaagggccgattgaggccatgctggaagcccgtaaagagggcggctatttcaaa
gagttatttgatttatgtgccagagttgatactaaaaaactcaatcgtcggattttagaa
aagcttattatgtccggtgcctttgaccgtttggggccgcaccgtgccgcattaatgagc
tcgttaggtgaagcattaaaagcagcagaccaacatgccaaagcagaagctattggtcag
gttgatatgtttggtgtattggcagatgcacctgagcaggttgagcaatcttatgctaat
gtgccgccgtggcaggagcagattgttttagatggtgagcgggaaacgctggggttgtac
ctgactggccacccaattacccagtatctgaaggaaatagaacgctatgccggtgggctg
cgtttgaaagatatgcacccgacggatcggggcaaaatgaccatggctgcgggattagtt
atcgctgcaagggttatggtgacaaaacgcggaaatcgtattggcatttgtacgttagat
gaccgttctgggcgtcttgaggtcatgctattcaccgatgcgttggaaaaatatcagcat
ttgttggaaaaagaccgtatcctgatagccactggacaggtcagctttgatgactttagt
ggtggacttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatatcgctgaccgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtcgttggaaccccatcgagcggggacgatcccagtgcatctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgcttattgatagatttgcgaacgttggtaggtaatgagcaggtggaactggaatttgac
taa
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