KEGG   Yersinia canariae: F0T03_19645
Entry
F0T03_19645       CDS       T06446                                 
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
yca  Yersinia canariae
Brite
KEGG Orthology (KO) [BR:yca00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yca03019]
    F0T03_19645 (csrD)
Messenger RNA biogenesis [BR:yca03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     F0T03_19645 (csrD)
SSDB
Motif
Pfam: EAL GAPES4 GGDEF GGDEF_2 Claudin_2
Other DBs
NCBI-ProteinID: QHB34158
UniProt: A0A857F3U6
LinkDB
Position
complement(4211602..4213521)
AA seq 639 aa
MRFTTKLSVFMTLLVVLAMCLVLLGSTASFFYLCQKKMEHRLQSIVTAYDQSLLLHPADK
EREWLPVMMRTLGVLEVSIQNEDSTLYQLKLPAIYTPWNGQIRHRSLVVPMLHQPGASMH
FTYIDPLSSYARSLYAAAILSLAVVIIALTLLLSFRWLREQTAGQEKLERRAKRILNGER
EYAINSDGHEWPPCASRAIDHLLAELIEAREERNRVDTLIRTFAAQDAKTGFSNRHFFDN
QLTTQMEESGAHGVVMMVQLPDFDSLIETDDHQQVQELMHSLINLLSTFVTRHPSALLAR
YHHSDIAILLPHKTLKDADVMAAQLVHAVGSLPEPHVIDRESLLHIGIVAYRNGDSAEQI
MDNVGQATKNAAMYGGNGWYVYDTQVAEKGRGSVKWRTLLEQTLVNGGPRLYQKPVVTVD
GKIHHREIISRIYDGEQELLAAEFTPLVQLFGLGELYDRQKIDRIIPLLALWPDETLAFS
ISVDSLLQRPFQRWLRDTLLQCRKSDRERIIFELAEADVCQYISQIRPMMRLLLGVGCKV
MVSQAGLTVVSTSYIKSLRVEMIKLHPGLVRSINLRYENQLFVESLTGACAGTHAKVFAA
EVLTREEWQTLKAKGVYGGQGNFFAPPTLLSPGKKKYSY
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgcgatttacaaccaaactttctgtatttatgactttgctggtcgtattagcgatgtgt
ttagtgctactgggtagcacggcaagctttttttatttgtgtcaaaaaaagatggagcac
cgccttcagagtattgtgacagcttatgatcagtcattgctgttgcaccctgctgataaa
gaacgcgaatggttgccggtaatgatgcggacgttgggtgttttggaagtaagcatccag
aatgaagacagcacgttatatcaactaaaactccctgctatttataccccttggaacggc
caaatccgccatcgcagtttggttgttcccatgctgcaccagccgggggcatcaatgcat
tttacctatattgaccccttaagcagctatgcccgatctctttatgctgccgctattttg
tcgttggcggtggtgattatcgcgctgacacttctattaagtttccgttggctacgtgaa
cagaccgcaggccaggaaaaactggagcggcgggccaaacgtattcttaatggcgaacgt
gaatacgctattaatagtgatggccacgaatggcccccttgcgccagtcgcgctattgat
catttattggcagagcttatagaagctagggaagagcgtaatcgtgttgatactttaatt
cgcacatttgctgcacaagatgccaaaacaggattcagtaaccgccatttttttgataac
caactgacgactcaaatggaagagtccggtgcccatggggtcgttatgatggtgcagtta
ccggattttgacagtttaattgaaacggatgatcaccagcaggtgcaagaactgatgcat
tcgctgattaatctgctttctacttttgttacgcgtcatccctctgcattattggcgcgt
tatcatcacagtgatattgcgattttactccctcataaaacgcttaaagatgccgatgtc
atggctgcacagttagtacatgcagttgggtcattacccgagccgcatgttattgaccga
gagtcattactgcacattggcattgtggcgtaccgcaatggcgattcagctgagcagata
atggataatgttggacaagcgaccaaaaatgcggcgatgtatgggggaaatggttggtat
gtttacgacacacaagttgcagaaaaagggcgtggtagcgtcaagtggcgcactttgctg
gaacaaactttggttaatggtggcccacggctttaccagaaacctgttgttacagttgac
ggtaaaattcaccaccgtgaaataatcagccgcatatatgatggcgagcaagagttgctg
gccgctgaatttacgccgctggtgcaattatttggtttgggtgagctttatgatcgccaa
aaaattgatcggataattcctttattagctttatggccggacgaaactctggcattttct
atcagcgttgattcattattacagcgtcctttccagcgctggctgcgggatacgttgttg
caatgcagaaaatcggatagagagcgaattatctttgaacttgcagaggcagatgtgtgt
caatatatcagccaaatccgtccgatgatgcgtttgttactgggtgtcggttgcaaggtc
atggtgtcacaggccggattgacggttgtcagtacgtcatatattaagtctctccgggtt
gaaatgattaaacttcatccgggattagtaagaagcattaatttacgttatgaaaatcag
ttgtttgtcgagagtctaacgggggcttgtgcaggaacgcatgcgaaagttttcgcagca
gaagttcttacccgtgaagaatggcaaactctgaaggcgaaaggtgtttacggtggacag
ggcaatttttttgctccgccgacgcttttgagccccggaaagaaaaaatattcgtattag

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