Yersinia enterocolitica (type O 5) YE53/03: YE5303_05841
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Entry
YE5303_05841 CDS
T03739
Symbol
recC
Name
(GenBank) exodeoxyribonuclease V gamma chain
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YE5303_05841 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_05841 (recC)
Enzymes [BR:
yee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
YE5303_05841 (recC)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YE5303_05841 (recC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TTc_toxin_rep
Motif
Other DBs
NCBI-ProteinID:
CCQ39294
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All DBs
Position
988937..992308
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AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWEMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLENPVFSAMKRYLSDDSD
KRKIHQLAARVADLFDQYLVYRPEWLESWERGQLIDNLDDAQQWQALLWVELTRYTRQLE
QPEWHRANLYQRFIRTLLESDVCPTGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRESVEVKLFRDPEQAEQLFNADGEQDLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVHAFVDIEPDNLLHGVQHDMLELEDHAIIGTTPETLAH
SHQKRVLDLRDRSLSIHVCHSPQREVEVLQDNLLRLLEADPELTPRDIIVMVADIDSYTP
YIQATFGNATGERYLPFAISDRKASQAHPALQAFISLLDLPQSRFTSEQVLALLEVPVLA
NKFGITEDGLRRLRQWVGESGIRWGLDDDNVRELSLPATGQHTWHFGLTRMLLGYAMDSN
AGDWQGVLPYDESSGLAAELAGQLADMLMQLSQWRQQLSESRSLSEWLPLCRQLLDTFFE
PDNDTEAVLVLIEQQWQKVISYGIAAQYPDIVPLNLLRDELASRLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAKQVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYISQSYHLPGDEELSADDSAKRVIQHL
LCWHARMPFAAENFTQDSELQSYAAEWLPAAESRGAAHPEFNQPLPPEPLPEITLDELIR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLNRYQFNTQLLNALIEESDINTVFT
RARAAGNLPYGSFGELYWENQQEEMLPLAEQIRTERKESHSIELNIESGDTTLTGWMHQI
QEDGLVRWRPAALTAVDGLLLWIEHLVYCAAGGEGESRMYGRKGTAWRYAPLDCDEARQY
LQQLISGYQQGMCEPLLLLSKSGWAWLSQCFDRESGQILWDEEIQTKARMKLLQVWQGDQ
RIAGEGEDNYIQRVFRLMDNQHLDMILNETERYLLPIARHNKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaattggatttactcaaagcgctaacaactgcgctg
atagaacgagaaccgttggataacccttttcagcaagaagtggtactggtgcaaagccca
ggtatggcccaatggctacaaatgcaattggctcaacaatttagcattgcagctaatatt
gaatttccattgcctgcgacctttatctgggaaatgtttacccgcgtgttacccggcatc
ccaaaagaaagcgcatttagcaaagatgccatgacatggaaactcatgtggttattgcct
gacctattggagaatccggtattttctgcgatgaaacgctatttaagtgatgatagcgat
aaacgtaaaattcaccaacttgcggcacgagtcgctgacctttttgaccaatatctggtg
taccgcccagaatggcttgagagttgggaacgaggtcaactcattgataatttggatgat
gcccagcagtggcaagctttactgtgggttgaattaacgcgctatacccgccaattagaa
caaccggaatggcatcgcgccaatctctatcagcgttttattcgcacacttctcgaatcc
gatgtttgtccgacagggctgcccaaacgagtattcatttgtggcatatccgctttaccc
ccaatctatttacaggccttacaagcactgggtaaacacattgatatccatttgatgttt
actaatccgtgccgttatttctggggagacattcaggattatgcttttctggccaagctg
caaagccgaaaacgcagacattatcgtgagtcggtggaagtaaaactgttccgtgaccct
gagcaggcggagcaactatttaatgctgatggtgaacaagaccttagtaacccgttatta
gcttcatgggggcgacttggtcgtgaccacatgtatctgttatctcaagttgatgagatc
caagaggttcatgcatttgttgatatcgaacccgataacctattacatggtgttcaacac
gatatgctggagcttgaagaccacgccattattggtactacgccagagacattagcgcat
agccaccaaaagcgagtattagatctcagggatcgctccctaagcatacacgtctgccac
agccctcagcgcgaagttgaagtcttacaagataatctgctgcgattattggaggctgac
cctgagctgactccgcgtgacattattgtcatggtcgctgacattgatagctataccccc
tatattcaggccacatttgggaatgctacaggggagcgctatttgccatttgcgatttca
gaccgcaaggctagccaggcacatcctgcacttcaggcttttatctctctacttgatttg
ccccagagccgttttacttctgagcaggtattagccctgctggaagtgcctgttttagcg
aataaatttggtattaccgaagatggattgcgtcgtttgcggcaatgggttggcgagtca
ggtatccgctggggattagatgatgacaatgtgcgtgagttgtctctgcccgcaaccggt
cagcatacctggcattttggcctgactcgtatgctgctgggttatgctatggacagcaat
gccggtgactggcaaggggttttgccctatgacgaatccagtggtttagcggctgagctt
gccgggcaattagcggatatgttgatgcaattgagccagtggcgacagcaattgagcgaa
tctcgttcactcagtgaatggctaccattatgccgtcaattattagataccttctttgag
cccgataatgatactgaagcggtgctggttttgattgaacagcaatggcagaaggttatc
agctatggtattgctgcccaatatccggatatcgtgccactgaatctgttacgggatgaa
ctggcttcgcgcctggacaatgaacgaattagccagcgtttcctcgcggggccaatcaat
ttctgcacactgatgccgatgcgttcaatcccgtttaaagtggtgtgcttattggggatg
aatgatggtgtttacccacgaacattaccaccgttgggttttgatttgatggctaaacag
gttcggcgcggtgaccgtagccgccgtgatgatgaccgctatctgttcctcgaagcatta
ctctccgcccagcagcagctctatatcagttatatcgggcgctcgattcaagacaacagt
aagcgctatccttcagttctggttagcgagttgattgaatacatttcacaaagttatcac
ttgccaggtgatgaagaactcagtgcagatgacagtgccaaacgggtcatacaacattta
ctctgctggcatgcgcgtatgccgtttgcagcagagaattttacccaagatagtgaatta
caaagttatgccgctgaatggttacctgctgctgagtccagaggggcggcacacccagaa
tttaatcagcctctgccaccagaacccttacctgaaatcactcttgatgaattaatccgc
ttctatcgccaccctgtgagggcttttttccaactccggttgggggtgaatttcgttatt
gaagaaacggagctacctgatgaagaaccttttactttggataacctcaaccgttatcag
tttaatactcaattattgaatgcattgatagaagaaagtgatatcaatactgtcttcacc
cgtgcccgtgcggcgggcaaccttccttatggttctttcggcgagctttactgggaaaat
cagcaagaagaaatgctgccattagctgaacaaattcgaactgaacgcaaagagagtcac
agtattgagctaaacattgagtctggggataccaccttgactggatggatgcatcaaatt
caggaagatggcttagttcgttggcgaccagcggcacttacggcggttgatgggctttta
ttgtggattgaacatttggtgtattgcgccgcaggcggtgagggtgaaagccggatgtat
gggcgtaaaggcactgcatggcgttatgcgccactggattgcgatgaagcacggcaatat
ttacagcagttaatcagtggctatcagcaaggtatgtgcgaacctttactcctactgagt
aaaagcggttgggcatggttgagtcagtgttttgatcgcgagtctggtcaaattttgtgg
gatgaagaaatacaaaccaaagcccgaatgaaacttttacaggtttggcaaggtgaccaa
cggattgccggagagggtgaggataactatatacaaagggtattccgcctgatggataac
caacatctcgacatgatattaaatgaaactgaacgttatttattaccaatagctcgccat
aataaggcgtga
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