Yersinia enterocolitica (type O 5) YE53/03: YE5303_05861
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Entry
YE5303_05861 CDS
T03739
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V beta chain
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
YE5303_05861 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_05861 (recB)
Enzymes [BR:
yee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
YE5303_05861 (recB)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YE5303_05861 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCQ39296
LinkDB
All DBs
Position
995296..998925
Genome browser
AA seq
1209 aa
AA seq
DB search
MTSMTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGEAAFRRPLMVEEI
LVVTFTEAATEELRGRIRDNIHELRIACVRGVSDDPMHQALLAEIIDLSEAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEHTLVQDELPLRRQACADFWRRHCYPLPLTI
ARAVSQEWSGPEALLKDLSAYLQGETPKFRQAPGDDETILSRHQQIVVQIDAVKAQWRAA
APELEALISSSGVDKRSYSARYLPSWLEKVGSWAEQETGDYQLPKELEKFRQSVLFEKTK
KGEAPQHDVFHAIDRIFEQPLTLRDLILARAISEIRISVQQEKRQRAELGFDDLLSKLDA
ALQQAGGELLAQSIRTRYPVAMIDEFQDTDPQQYRIFHTLYGGQEECGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLETNWRSSFPMVQSVNRLFSLVDVPFLFKQIPFINVVP
AQKNKQLSFEIKGKKQPAMSFWLQPGEGVGVSEYQQLMARQCAAQIRDWLTAGQKGLAQL
VTATSSRPVQASDITILVRSRAEAALVRDALSALAIPSVYLSNRDSVFDTAEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDARMLDELNHDERAWDALVDEFDGYRQHWQRRGVLPM
LREIMAQRHLAENLLATQGGERRLTDLLHLGELLQEAASQLDSEHALIRWLAQQIAQPNH
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVGNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSIGIAPLIKGGRKKQGESDMHLSALGY
LVQQGQAGDAQYLADKLAQLAALADGEISVSQAGQLDETPWLPQQDELPALAARQFSRQI
HDFWRVTSYSGLQQHGSSKSVASQALSVPLQELLPRLDTDAVGEQVLITEPQLTPHTFPR
GAAPGTFLHDLLEPLDFSQSIEQDWLTEQLQQQGFGEHWSSMLYQWLTDIVQTPLNETGV
TLAQLTPESKQAELQFYLPIDTLLQARELDTLIKHYDPLSRQCPVLDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTHDAMAQAMAEHRYDLQYQLYTLALHRYLRHRLG
HYDYQRDFGGVIYLFLRGVDKQHPGNGIFSCRPERELIERMDCLFSGREVGPHISDNSGM
AITGEGTSI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgactccccagcggctggaaccgctaacgctccccttgtatggcgagagg
ctaattgaagcttccgccggtacaggtaagacttttaccattggggttctttatctcaga
ttgttgcttggcttaggcggggaagcagcgtttcgtcgccccttaatggtcgaggaaatc
ctggtggtgacctttaccgaagcagcaactgaggagttgagggggcgaattcgtgacaat
attcatgagttacgtatcgcctgcgtacggggagtcagtgatgatccaatgcatcaggct
ttgttagctgaaatcattgatttgagtgaggccgcagcgcaattactggcagctgagcgc
cagatggatgaagcggcaatttatactattcacggtttttgtcagcgaatgctggctaac
aatgcctttgaatcgggcatcttattcgaacataccttggtgcaagatgagctgccatta
cgcaggcaagcttgcgccgatttctggcggcgtcattgctatccgctcccgttgactatt
gccagagcggttagccaggagtggagtgggccagaggcattacttaaagatctttctgct
tacttacaaggtgaaacgccaaaatttcggcaagcgcctggtgatgatgaaacgatactc
agtcgacatcagcagatagtggtacaaattgatgcagttaaggcgcaatggcgcgcagct
gctccagagttagaggcgctgattagtagttctggtgttgataaacgcagctacagtgct
cgatatttacctagctggttggaaaaagtcggtagctgggctgagcaggaaaccggcgat
tatcagttgcccaaagagttagagaaattccgccaatcagtactatttgaaaaaaccaaa
aagggtgaggctcctcagcacgatgtcttccatgctatagaccgtatattcgaacaacct
ctgacactaagagatctgattttagcccgagctatcagcgagatacgaatctctgtgcag
caagaaaaacgccagagggcagagctggggtttgatgatctgctcagtaaactggatgcg
gcattgcaacaagctggtggagaattgttggctcaatccattcgcactcgttatcccgta
gcaatgattgatgagtttcaagataccgacccgcaacaataccgaattttccacacactt
tatggtgggcaagaagagtgcggcctattactgattggtgaccctaaacaggctatttac
gcttttcgtggtgccgacatttttacttatattcgtgctcgctcagaagtaagtgcccac
tacacattagagactaactggcgctcatcattcccaatggtgcaatcagttaaccggctt
tttagtctggtcgatgttccttttttgtttaaacaaattccctttataaatgtggtgcct
gcgcaaaaaaataagcaattatcatttgaaataaaagggaaaaaacagccagctatgtct
ttctggttgcagcctggggaaggtgtaggggttagtgagtaccaacaattaatggcacgg
caatgtgccgcccaaatccgagactggcttactgctgggcaaaaaggtttggcgcaatta
gtgacagccacaagttcaaggccggttcaggcgtcagatatcaccatattggtgcgtagt
cgggcagaggcggcattggtgcgcgatgccctgagtgcattggcaatcccatccgtgtat
ctctccaaccgtgatagcgtatttgatactgctgaggccaaagatctgctgtggctattg
caggctgttttggctcccgagcaggagcgggcattacgcagcgctatggcgaccggcatc
ttggggctggatgcgcgaatgttggatgagttgaatcacgatgagcgagcttgggatgct
ttggttgatgagttcgatggttatcgccaacattggcagcgccgtggggtgctcccgatg
ctgcgggagattatggctcagcgccatttagctgagaatttgctggcaactcagggcggt
gaacggcggctaacagatttgctgcatttgggcgaattattgcaagaagcagcatcacag
cttgatagtgagcacgcactcatccgttggctggcgcaacaaatagcacaaccgaatcat
cagtctgataaccaacaacttcgtttggaaagtgatcgacatttggtgcaagtcattact
atccataaatccaaaggattggaatacccgctggtttggctaccttttgtgggcaatttc
cgccagcagcaagacgtgctctatcatgatcgccacagctttgaagcattacttgatctg
aatgctgatgaagaaagccaggctttggcggaggaagaacgtctggctgaggacttacgg
ttattatacgtagcactcacccgtgcggtttatcattgcagcataggtattgccccgttg
attaaaggggggcgaaaaaaacagggtgaaagtgatatgcatctcagcgcgttaggctat
ctggtgcaacaaggtcaggcgggagatgcgcagtatcttgctgataaactggcacagtta
gcggcgctggcagatggagagatttctgtttcacaagccgggcaactggatgagacacct
tggctgccgcagcaggatgagttgccagcccttgctgctcgacagtttagtcgccaaata
cacgatttttggcgggtcaccagctattccggcctacaacagcatggctcgagtaaaagc
gtagcctcacaagcgctgagtgtaccattacaggagttattaccacggttggatactgac
gctgttggtgagcaggtattaataactgagcctcagttaacccctcataccttcccccga
ggtgcggcacccggtactttcttgcatgatttacttgaacctctggatttcagccagtcg
attgaacaagactggctgacagagcagttacagcaacaaggttttggtgagcattggtca
tctatgctgtatcagtggctaactgacattgtacaaacccctctaaatgaaaccggtgtg
acattggcgcaattgacaccagagagcaagcaagccgagttgcaattttatttgccgata
gacactttactgcaagcgcgtgagctagataccttaatcaagcactatgacccactctct
cgccagtgcccggtgttggattttcagcaagtcagaggaatgctgaaagggtttattgat
ctggttttctgctggcaaggcaaatattacttactggattacaaatccaactggttgggt
gaggacagcagtgcctatacccacgatgcgatggcccaagccatggctgagcatcgttat
gacttgcaatatcagctttatactctggcattacaccgctatttgcgtcatcgattgggt
cattatgactatcagcgcgactttggtggtgtcatttatctcttcctgcgtggtgttgat
aaacaacatccggggaacggcatttttagctgccgccctgaacgagaactcattgagaga
atggactgtttattcagtggtcgtgaagtagggccgcatattagtgacaacagtggtatg
gcgataaccggtgagggcacatcgatatga
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