Yersinia enterocolitica (type O 5) YE53/03: YE5303_13801
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Entry
YE5303_13801 CDS
T03739
Symbol
himD
Name
(GenBank) integration host factor beta-subunit
KO
K05788
integration host factor subunit beta
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yee03032
]
YE5303_13801 (himD)
03036 Chromosome and associated proteins [BR:
yee03036
]
YE5303_13801 (himD)
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_13801 (himD)
DNA replication proteins [BR:
yee03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
YE5303_13801 (himD)
Chromosome and associated proteins [BR:
yee03036
]
Prokaryotic type
Nucleoid associated proteins
IHF (integration host factor)
YE5303_13801 (himD)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Facilitator
YE5303_13801 (himD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_2
HU-CCDC81_bac_2
HAAS
MDMPI_C
Motif
Other DBs
NCBI-ProteinID:
CCQ40085
LinkDB
All DBs
Position
1889022..1889306
Genome browser
AA seq
94 aa
AA seq
DB search
MTKSELIERLAGQQSHVPTKVVEDAVKEMLEHMAGTLAEGERIEIRGFGSFSLHYRAPRV
GRNPKTGAKVELEGKYVPHFKPGKELRDRANIYG
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaccaagtctgaacttattgaaagacttgctggccagcaatctcatgtaccgactaaa
gtcgttgaggatgcagtgaaagaaatgcttgaacatatggctggaacactagctgaaggt
gagcgcattgagatccgcggatttggcagtttttctcttcactaccgtgctccgcgtgtt
ggccgtaatccaaagaccggcgctaaagttgagttggaaggtaagtacgttccacacttt
aagccaggtaaagagttacgtgatcgcgcgaatatctacggttaa
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