Yersinia enterocolitica (type O 5) YE53/03: YE5303_16791
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Entry
YE5303_16791 CDS
T03739
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yee03016
]
YE5303_16791 (rnd)
Enzymes [BR:
yee01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
YE5303_16791 (rnd)
Transfer RNA biogenesis [BR:
yee03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
YE5303_16791 (rnd)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
RNAseD_HRDC_C
HRDC
Motif
Other DBs
NCBI-ProteinID:
CCQ40381
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All DBs
Position
2215759..2216880
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AA seq
373 aa
AA seq
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MNYQLITTDSALQQVCEQARTHAHVALDTEFVRTRTYYPQLGLIQLYDGEKLSLIDPLPI
TQWQPFRELLQDLNVVKYLHAGSEDLEVFLNAFELMPTPMIDTQVLAAFSGRSLSCGFAM
LVNEFEGVELDKSESRTDWIARPLSEKQCDYAAADVFYLLPLATKLVAATEAAGRMDAAK
DECELLCRRRSETLDPELAYREITNAWQLRGHQLACLQKLASWRLRQARERDLAVNFVVR
EENLWQVARYQPTSLGELDSLGLSGQEIRYHGRTLLALVAEGNAVPEDQLPPPVINLIDQ
PGYKKVFKDIKALIVSVSERSGLSSELLASRRQINQLLSWHWKLKSTETQPELLSGWRGD
LLATELTDILQQY
NT seq
1122 nt
NT seq
+upstream
nt +downstream
nt
ttgaattatcagttgatcacgaccgacagtgcgttgcagcaggtctgcgaacaagcccga
acacatgcccatgttgcgctggatacagagtttgtcagaactcgcacctactaccctcag
ttgggcctgattcaactgtatgatggtgaaaaactttcgctgattgatcctttgcccatc
acgcagtggcagcctttccgtgagttgttgcaagatttaaatgtagtgaagtacctacat
gccgggagtgaagatctcgaagtgtttttgaatgcttttgaactgatgcctacaccgatg
attgatactcaggtgttggcggcattttctggccgctcgttatcttgcggtttcgccatg
ttggtgaatgaatttgaaggcgtcgaattagataaaagcgaatctcgcacggattggatt
gctcgtcctctgagtgaaaaacagtgtgattatgcggctgctgacgtattttacctatta
ccgttagcgactaaattagttgcagcgaccgaagcagcaggacgtatggacgccgctaaa
gacgaatgtgagctgttgtgtcgccgccgtagtgaaacactcgatcccgaattagcctac
cgtgaaatcaccaatgcctggcagttgcgtggccatcagttggcttgtctgcaaaaattg
gcgtcatggcgcttacgtcaggctcgcgaacgtgacctggcggtgaactttgtggttcgc
gaagagaatctgtggcaagttgcccgttatcagccaacctcgctgggtgagcttgactct
ctgggcttaagtgggcaagagatccgctatcatggccgcactttactggcgttggtagcg
gaaggtaatgctgttcctgaggatcagttgccaccaccggttatcaatctgattgatcag
ccaggttacaaaaaagtctttaaagatattaaagcacttattgtgtcggtcagtgaacgc
agtgggttaagtagcgaattgttggcgtcacgccgccaaataaaccaattactcagttgg
cattggaaattgaagtcgacagaaactcaacctgaattattaagtggctggcgtggggat
ttattggctacggaattgactgatattttacagcaatattaa
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