Yersinia enterocolitica (type O 5) YE53/03: YE5303_25971
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Entry
YE5303_25971 CDS
T03739
Symbol
rumA
Name
(GenBank) 23s rRNA (uracil-5-)-methyltransferase
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yee03009
]
YE5303_25971 (rumA)
Enzymes [BR:
yee01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
YE5303_25971 (rumA)
Ribosome biogenesis [BR:
yee03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
YE5303_25971 (rumA)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
TRAM
Methyltransf_31
Methyltransf_25
PCMT
RrnaAD
TRM5-TYW2_MTfase
MTS
Methyltransf_11
Methyltr_RsmB-F
Cons_hypoth95
Motif
Other DBs
NCBI-ProteinID:
CCQ41910
LinkDB
All DBs
Position
complement(3917845..3919176)
Genome browser
AA seq
443 aa
AA seq
DB search
MAQFYSPNRRVTTKQTLTVTVNSLDPFGQGVAHHQGKAIFILGALPGEQAEIELTEQKRQ
YSRGKLKRLLNRCNERVVPACPHFGICGGCQQQHANSQLQQMSKVDSLQRLIMREAGACP
ELDPVICGPEYGYRRRARLGLLYHPKQHRLQMGFRQTESHDLVCIKHCPVLRPELECLLL
PLYQCLSGLQAVRRLGHVELVLAANGPLMVLRHLDTLKEVDRAALIDFAKREQVAVYLAG
DSDNVEKLIGEEPYYQIEGLRLAFHPRDFIQVNDTVNQQMVAQAIAWLDVQPDERVLDLF
CGMGNFTLPLAKLAREVVGVEGVAALVANGQYNALNNALPNVSFFHENLESDISCQPWAT
QGFDKVLLDPARAGAAGVMSHIVKLAPKRVVYVSCNPTTLARDSQVLLAAGYRLAQVRML
DMFPHTGHLESMALFMQEPGVAK
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggcgcaattctactctccaaaccgacgtgtgacgaccaaacaaacgctaactgtgacc
gtaaactcgcttgacccttttgggcaaggggtagcgcaccaccaaggcaaagctatcttt
attcttggagctctaccaggagagcaagctgaaatagagcttaccgagcaaaagcgccaa
tatagtcgcggtaagcttaaacgtttgttgaaccgatgcaacgaaagggtcgttcctgct
tgccctcacttcggaatttgtggaggctgtcagcagcaacacgccaatagtcagctacag
caaatgagcaaagtagattcactccagcgtttgattatgcgagaggctggcgcttgccct
gaattagacccggttatttgcgggccggaatacggctatcggcggcgggcgaggttaggg
ctgctctatcatcccaagcagcatcgattgcaaatggggtttcgccaaaccgagtctcat
gatttagtttgcatcaagcactgcccggttttacgacctgagttggagtgcttgttatta
ccactttatcaatgtttatcgggcttacaggctgttcgccgccttgggcatgtggaactg
gtattagccgctaatggtccgttgatggttttacgccaccttgatacccttaaagaggta
gaccgtgcggcgttaattgactttgccaaacgagagcaggtcgccgtctatctggctggt
gatagtgataatgtggaaaaactcattggtgaggaaccctattaccagattgagggtcta
cgcttagcgtttcatccgcgcgattttattcaagtcaatgatacggtcaaccagcaaatg
gtggctcaggctatagcatggctggatgtgcagcctgatgagcgggtgctggatctattc
tgcggtatgggcaatttcaccttgccgctggcaaagttggctcgcgaagtggttggcgtg
gaaggagttgcggcgttggtggcgaatgggcagtataatgctctgaataacgcgttgccc
aatgtatcttttttccatgaaaatctggaatctgacatcagttgccagccgtgggcaaca
caagggttcgataaagtattgttagatcccgcccgcgcaggtgctgccggggtcatgtca
catatagttaaactggcgccaaagcgggtggtgtatgtttcgtgtaatcccactacgctg
gcacgagatagtcaggtgttgttagccgccggttaccgtcttgctcaggtgcgaatgttg
gatatgtttccccacaccgggcatcttgaatctatggcgctgtttatgcaggagccaggg
gtcgcaaagtag
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