Yersinia enterocolitica (type O 5) YE53/03: YE5303_26661
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Entry
YE5303_26661 CDS
T03739
Symbol
ddlB
Name
(GenBank) D-alanine--D-alanine ligase B
KO
K01921
D-alanine-D-alanine ligase [EC:
6.3.2.4
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00470
D-Amino acid metabolism
yee00550
Peptidoglycan biosynthesis
yee01100
Metabolic pathways
yee01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YE5303_26661 (ddlB)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
YE5303_26661 (ddlB)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
YE5303_26661 (ddlB)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yee01011
]
YE5303_26661 (ddlB)
Enzymes [BR:
yee01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.4 D-alanine---D-alanine ligase
YE5303_26661 (ddlB)
Peptidoglycan biosynthesis and degradation proteins [BR:
yee01011
]
Precursor biosynthesis
Amino acid ligase
YE5303_26661 (ddlB)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Dala_Dala_lig_C
Dala_Dala_lig_N
CPSase_L_D2
ATP-grasp_4
ATP-grasp
ATP-grasp_3
RimK
ATPgrasp_YheCD
TTL
Decapeptide
Motif
Other DBs
NCBI-ProteinID:
CCQ41979
LinkDB
All DBs
Position
complement(4004859..4005779)
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AA seq
306 aa
AA seq
DB search
MAEKVAVLLGGTSAEREVSLLSGEAVLAGLREAGIDAHGIDTKDFPVTQLKEQGFDKVFI
ALHGRGGEDGTLQGVLEFLQLPYTGSGVMASALTMDKLRTKLVWQASGLPISPYVALNRQ
QFETLSSEELAACVAKLGLPLIVKPSHEGSSVGMSKVDQANQLHSALVEAFRHDTDVLIE
KWLSGPEFTVAILGNDVLPSIRIQAPGVFYDYEAKYLSDETQYFCPSGLSAELEQQLAAL
SLQAYQALGCSGWGRVDVMQDSDGRFYLLEVNTSPGMTSHSLVPMAARQYGLSFSQLVAR
ILTLAD
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaagttgcggtactgctgggtgggacctctgctgaacgtgaagtgtcattg
ttatcaggcgaggcggtattagcgggcttgagagaggcgggtatcgatgctcatggtatt
gatactaaagacttcccggtaacacagcttaaagagcaaggctttgataaggtttttatc
gctttgcatgggcgcggtggtgaagacggtacgctgcaaggagtgttggagtttctgcaa
ctgccttataccggcagtggtgtgatggcttcagcgctgacaatggacaaattgcgtacc
aaattggtgtggcaagcttcaggtttgccaatttcgccttatgtcgcgctaaatcgtcaa
cagtttgaaacactttcgtcagaggaattggcggcgtgtgtcgctaagcttggcctgcca
ttaatcgttaagccaagtcatgaaggctctagcgtaggaatgagtaaggttgatcaggcg
aatcaattgcattctgctctggttgaagctttccgtcacgacactgatgtgctgattgag
aaatggttgagtgggccagaatttaccgtcgcgatccttggtaatgatgttttaccgtcg
attcgcattcaggctcccggtgtgttttatgattatgaagctaaatatctgtctgatgag
acccagtacttctgcccaagtggcttgagtgctgagttagaacaacagttggctgcattg
tcattacaggcctatcaggcattgggttgcagcggctggggccgagttgatgttatgcaa
gatagcgatggccgtttctacctgcttgaagtgaatacttcaccgggtatgaccagccac
agtttagtgccgatggctgcccgccaatatgggttgagtttttcccagttggtggcccga
attctgacgttggctgactga
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