Yersinia enterocolitica (type O 5) YE53/03: YE5303_27001
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Entry
YE5303_27001 CDS
T03739
Symbol
hepA
Name
(GenBank) RNA polymerase associated helicase
KO
K03580
ATP-dependent helicase HepA [EC:5.6.2.-]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yee03021
]
YE5303_27001 (hepA)
Transcription machinery [BR:
yee03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
RNA polymerase-associated proteins
YE5303_27001 (hepA)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RapA_C
Tudor_RapA
Tudor_1_RapA
SNF2-rel_dom
Helicase_C
ResIII
DEAD
AAA_34
Cas3-like_C_2
Flavi_DEAD
Motif
Other DBs
NCBI-ProteinID:
CCQ42013
LinkDB
All DBs
Position
4051186..4054092
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AA seq
968 aa
AA seq
DB search
MPFTLGQRWISDTESELGLGTVVAIDVRMVTLLFPATGENRLYARNDSPITRVMFNPGDT
ITHHEGWQLKVEEVSEENGLITYIGTRLDTEETGVSMREVLLDSKLTFSKPQDRLFAGQI
DRMDRFALRFRARKYQSEQFRLPWSGLRGIRASLIPHQLHIAYEVGQRHAPRVLLADEVG
LGKTIEAGMIIHQQLLSGRAERILIVVPESLQHQWLVEMLRRFNLRFSLFDDSRYSEALL
DSTNPFETEQMVICSLDFVRRNKQRLEQLADASWDLLVVDEAHHLAWSEEAPSREYQVIE
QLAEHIPGVLLLTATPEQLGQQSHFARLRLLDPDRFHDYEEFINEQQKYRPIADAVTLLL
GGERLTDDKLNLLGELINEQDIEPLLKAANSQTEDSEAARQELVTMLMDRHGTSRILFRN
TRNGVKGFPHRVLHQIKLPLPTQYQTAIKVSGIMGAKKSLEARAKDMLYPEQIYQEFEGE
NATWWNFDPRVEWLLNYLIANRNEKVLVICAQAATALQLEQVLREREAIRAAVFHEGLSL
IERDRAAAYFASEEDGAQVLLCSEIGSEGRNFQFACQLVMFDLPFNPDLLEQRIGRLDRI
GQNREIQIMVPYLENTAQAILVRWYHEGLDAFEHTCPTGRTIYDSGYQELITYLATPSEQ
EGLDEFIHTCRQQHEGLKLQLEQGRDRLLEMHSNGGEHGQELAEIIADQDNDVNLVSFAL
NLFDIVGINQEDRSDNLIVLTPSDHMLVPDFPGLPQDGCTVTFDREQALSREDAQFVSWE
HPIIRNGLDLILSGDTGSCAVSLLKNKALPVGTLLAELVYVVEAQAPKHLQLTRFLPPTP
VRMLMDKNGTNLAAQVEFESFNRQLNAVNRHTSSKLVNAVQQEVHAMLQQAEALVEEQAR
LLIEAAKHEADDKLSAELARLEALKAVNPNIRDDEIETLEHNRKMVLENLNQAGWRLDAI
RLVVVTHQ
NT seq
2907 nt
NT seq
+upstream
nt +downstream
nt
atgccttttacacttggtcaacgctggatcagcgatacagaaagcgaacttggattgggt
actgtcgttgccattgacgtacgcatggtcaccttactgtttcccgcaaccggtgaaaac
cgactttacgccagaaatgattctcccattacccgtgtcatgtttaatccgggcgatacc
atcactcaccacgaaggctggcagctgaaagtggaagaagtgtctgaggagaacgggctg
attacctacattggtactcgcctggataccgaggaaaccggcgtttccatgcgtgaagtt
ttgctcgatagcaaactgacttttagcaaaccgcaagatagattatttgccggccagatc
gatcgcatggatcggtttgccctgcgttttcgcgcccgcaaataccaaagtgagcagttc
cgcctaccctggagtggtttgcgcggcatccgtgccagcttgatcccacaccaattacat
atcgcctatgaagtgggtcaacgccatgcgccacgcgtcttgctggccgatgaagtagga
ttgggtaaaactatcgaagccgggatgattatccatcagcaactgctgtcaggccgtgct
gaacgtatcctgattgtggtgccggaaagcttgcaacaccagtggctggtcgaaatgctg
cgccgcttcaatctgcgcttctcattgtttgatgacagccgttattccgaagccctgctc
gacagtaccaatccgtttgaaacggaacaaatggtcatttgttcgctggactttgtgcgc
cgtaacaagcagcgtctggagcaattagccgatgcgtcctgggacctgctggtggtggat
gaagcacaccatctggcctggagtgaggaagcaccgagccgcgaatatcaagttattgaa
caactggccgagcatattcccggcgtcttgctgctgaccgcaacaccagagcaactgggc
cagcagagccactttgctcgcttgcgtctgcttgatcctgaccgcttccacgattacgaa
gaatttattaatgagcagcaaaaataccgcccaatcgccgatgctgtcaccttgctgctg
ggtggtgagcgcttaactgacgataagctgaatctgctcggtgagctgattaacgagcag
gatatcgagccactgctgaaagcggcaaacagccaaactgaagatagcgaagcggcacgt
caagagttggtgactatgctgatggacagacatggcaccagccgtatcttgttccgtaac
acccgtaatggggtgaaaggcttcccacaccgtgtcttgcatcagattaagctgccactg
ccaactcaataccaaacggcaattaaagtgtcaggcattatgggggccaagaaaagcctc
gaagcacgggccaaagacatgctttatccagagcaaatctaccaagaattcgaaggcgaa
aacgccacttggtggaactttgacccacgggttgaatggctgcttaactacctgattgct
aaccgcaatgagaaagtgctggttatttgtgcacaagccgccaccgcattgcagcttgaa
caagtgctgcgcgaacgcgaagctatccgtgccgcagtattccatgaaggtttatcactg
attgaacgtgaccgcgcggcggcctattttgcctccgaagaagacggcgcacaggtatta
ttgtgttcagaaatcggctctgaagggcgtaacttccagtttgcctgccaactggtgatg
ttcgatttaccttttaatccggacttgcttgagcaacgtattggtcgtctggataggatc
ggccaaaaccgtgaaatccagataatggtgccgtatctggaaaataccgcgcaggcgata
ctggtgcgctggtatcacgaaggtttggatgctttcgagcacacctgcccgacgggccgc
actatttatgacagcggctatcaagaattgattacttatctggcaacgccaagtgaacag
gaagggctggatgaatttatccacacctgtcgccagcagcatgaagggctgaaactgcaa
ttggaacagggccgtgaccgcttgctggagatgcactccaacgggggcgaacatgggcaa
gaactggcagaaatcattgcggatcaagacaatgacgtcaatttagtcagttttgcgctg
aacctgttcgatattgttgggatcaaccaggaagatcgcagcgacaatttgattgtgctg
acgccatctgaccatatgctggtgccggatttcccaggattaccacaggatggttgcacg
gtgacatttgatcgcgaacaggcgttatcgcgcgaagatgctcagtttgtcagttgggaa
cacccgatcatccgtaacggtttggatctgatcctctccggtgacaccggaagctgtgcg
gtttcgctgttgaaaaataaagcattgccagtaggtactctgcttgctgaattggtctat
gtggttgaagcgcaagcgccgaaacacttgcaattgacccgcttcttacccccaacaccg
gtacggatgctgatggacaagaatggcaccaacctggcagcacaagtagaatttgaaagc
ttcaatcgccagttgaatgccgtcaatcgccatacctccagcaaactggtcaacgcggtt
cagcaagaagttcacgcaatgttgcaacaagcagaagcactagttgaagaacaggcgcgt
ttgctgattgaagcagccaagcatgaagcggacgataaattgagtgccgagctggcacgt
ttggaagccctgaaagcggttaaccccaatattcgtgatgacgaaatagagactctggaa
cataaccgtaaaatggtgctggaaaaccttaatcaggcgggttggcgtttggatgccatt
cgtctggtggtggtgacacaccagtaa
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