Yersinia enterocolitica (type O 5) YE53/03: YE5303_28981
Help
Entry
YE5303_28981 CDS
T03739
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YE5303_28981 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yee03019
]
YE5303_28981 (pnp)
03016 Transfer RNA biogenesis [BR:
yee03016
]
YE5303_28981 (pnp)
Enzymes [BR:
yee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
YE5303_28981 (pnp)
Messenger RNA biogenesis [BR:
yee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YE5303_28981 (pnp)
Transfer RNA biogenesis [BR:
yee03016
]
Prokaryotic type
tRNA degradation factors
YE5303_28981 (pnp)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
aRib
KH_2
OB_RRP5_4th
S1_2
UPF0181
OB_PDCD11
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
CCQ42209
LinkDB
All DBs
Position
complement(4301455..4303575)
Genome browser
AA seq
706 aa
AA seq
DB search
MLTPIIRKFQYGQHTVTIETGMMARQATAAVMVSMDDTAVFVTVVGQKKAKPGQSFFPLT
VNYQERTYAAGRIPGSFFRREGRPSEGETLTSRLIDRPIRPLFPDSFLNEVQVIATVVSV
NPQINPDIVALIGASAALSLSGIPFNGPIGAARVGFINDQYVLNPTTDELKESRLDLVVA
GTAGAVLMVESEADILSEDQMLGAVVFGHEQQQVVIENINALVAEAGKPKWDWHAEPVNE
ALHARVAELAAARLGDAYRITEKQERYTQVDAIKADVTEALLAQDDTLDAAEIQDILGSV
EKDVVRSRVLRGEPRIDGREKDMIRGLDVRTGVLPRTHGSALFTRGETQALVTATLGTAR
DAQNIDELMGERTDSFLLHYNFPPYSVGETGMVGSPKRREIGHGRLAKRGVLAVMPSPSE
FPYTVRVVSEITESNGSSSMASVCGASLALMDAGVPIKAAVAGIAMGLVKEDENFVVLSD
ILGDEDHLGDMDFKVAGSRDGITALQMDIKIEGITREIMQVALNQAKGARLHILGVMEQA
ISTPRGDISEFAPRIYTMKINPEKIKDVIGKGGSVIRALTDETGTTIEIEDDGTIKIAAT
DGDKAKHAIRRIEEITAEIEVNRIYAGKVTRIVDFGAFVAIGGGKEGLVHISQIADKRVD
KVTDYLQMGQEVPVKVIEVDRQGRIRLSMKEATTPDAEAPAPEAAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
ttgctgactccgattattcgtaaattccagtacggccaacataccgttaccattgaaact
ggcatgatggctcgccaggcgactgctgccgttatggtcagcatggatgacaccgcagta
ttcgttactgttgttggccaaaagaaagctaaaccaggccagagtttcttccctctgact
gttaactatcaggagcgtacctacgctgctggtcgtatcccaggcagctttttccgtcgt
gaaggccgcccaagtgaaggcgaaacactgacttcacgtctgattgaccgcccgattcgc
ccactgttcccagacagcttcctgaatgaagttcaggttattgcgactgttgtttctgtt
aacccacaaattaacccagacatcgtggcactgattggtgcatcagctgcgctgagcctg
tcaggtattccattcaacggcccaatcggtgctgctcgtgttggttttatcaacgaccag
tatgtgctgaacccaaccaccgatgagctgaaagaaagccgtctggacttggttgttgcc
ggtactgcgggtgcagtattgatggttgaatcagaagcagacatcttgtctgaagatcaa
atgttaggcgcggttgtcttcggccacgaacaacagcaagttgtgattgaaaatatcaac
gctctggttgctgaagcgggcaaaccgaagtgggattggcatgctgagccagtaaacgaa
gcgctgcatgcgcgcgttgctgagctggctgctgcacgtctgggcgatgcttatcgcatt
accgagaaacaagagcgttatactcaagttgatgctatcaaagctgatgtgactgaagca
ctgttagcgcaagacgatacattagatgctgcggaaattcaggatatcctgggtagcgtt
gagaaagacgtagttcgtagccgtgtactgcgtggcgaaccgcgtatcgatggtcgcgaa
aaagacatgatccgtggtctggatgtgcgtactggcgtgttgccgcgtacccacggttct
gcgttgttcacccgtggtgaaactcaggcgctggttacagcaacactgggtactgcacgt
gatgcacaaaatattgatgagctgatgggtgagcgtactgactcattcctgctacactat
aatttccctccatattctgttggtgaaacaggtatggttggttcaccgaaacgtcgtgag
attggccatggtcgtctggcgaaacgtggtgtgttggcagtgatgccaagcccgagcgag
ttcccttacactgtgcgtgtggtttctgaaatcaccgagtctaacggttcttcctcaatg
gcttctgtttgtggtgcttccctggccctgatggacgcaggtgtgccgattaaagccgct
gttgccggtatcgcaatgggtctggtgaaagaagatgaaaactttgttgttctgtctgac
attctgggtgacgaagatcacttgggcgacatggactttaaagtagccggtagccgtgac
ggtatcaccgcactgcaaatggacattaaaattgaaggtatcacccgcgaaatcatgcag
gtagctctgaaccaggctaagggtgcgcgtctgcacattctgggtgttatggaacaggct
atcagcactccgcgcggcgatatctctgagtttgctccacgtatctacaccatgaaaatc
aatcctgagaaaatcaaggatgtgatcggtaaaggcggttctgtgattcgtgcgctgact
gatgaaactggcaccaccattgaaatcgaagatgatggcaccattaagattgcagcaact
gacggcgataaagcgaaacatgctatccgtcgtatcgaagagattactgctgaaatcgaa
gtgaaccgtatctatgcgggtaaagttactcgtatcgttgatttcggtgcatttgttgct
atcggcggcggtaaagaaggcttggtacatatttctcaaatcgctgacaagcgtgttgat
aaagtgactgattacctgcaaatgggtcaggaagtaccggttaaagttatcgaagttgat
cgccaaggccgtatccgcctgagcatgaaagaagcgactactcctgatgcagaagcaccg
gcaccagaagcagcagagtaa
DBGET
integrated database retrieval system
