Yersinia enterocolitica (type O 5) YE53/03: YE5303_29791
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Entry
YE5303_29791 CDS
T03739
Symbol
crpA
Name
(GenBank) 60 kDa chaperonin
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YE5303_29791 (crpA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yee03019
]
YE5303_29791 (crpA)
03110 Chaperones and folding catalysts [BR:
yee03110
]
YE5303_29791 (crpA)
03029 Mitochondrial biogenesis [BR:
yee03029
]
YE5303_29791 (crpA)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
yee04147
]
YE5303_29791 (crpA)
Enzymes [BR:
yee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
YE5303_29791 (crpA)
Messenger RNA biogenesis [BR:
yee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
YE5303_29791 (crpA)
Chaperones and folding catalysts [BR:
yee03110
]
Heat shock proteins
HSP60 / Chaperonin
YE5303_29791 (crpA)
Mitochondrial biogenesis [BR:
yee03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
YE5303_29791 (crpA)
Exosome [BR:
yee04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
YE5303_29791 (crpA)
Exosomal proteins of other body fluids (saliva and urine)
YE5303_29791 (crpA)
Exosomal proteins of breast cancer cells
YE5303_29791 (crpA)
Exosomal proteins of colorectal cancer cells
YE5303_29791 (crpA)
Exosomal proteins of bladder cancer cells
YE5303_29791 (crpA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
CCQ42291
LinkDB
All DBs
Position
complement(4389577..4391223)
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFGNDARIKMLRGVNILADAVKVTLGPKGRNVVLDKSFGSPTITKDGVSVAREI
ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQSIITEGLKAVAAGMNPMDLKRGI
DKAVIAAVEELKKLSVPCSDSKAIAQVGTISANSDSTVGELIAQAMEKVGKEGVITVEEG
SGLQDELDVVEGMQFDRGYLSPYFINKPETGSIELESPFILLADKKISNIREMLPVLEAV
AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV
ISEEIGLELEKTTLEDLGQAKRVVINKDTTIIIDGVGDEATIQGRVAQIRAQIEEATSDY
DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI
RAAHALANLKGDNEDQNVGIKVALRAMESPLRQIVVNAGEEASVIANKVKAGKDSFGYNA
YTEEYGDMIAMGILDPTKVTRSALQYAASIAGLMITTECMITDLPRDDKGADMGAGGMGG
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtaaaattcggtaacgacgctcgcatcaaaatgctacgcggcgta
aacattcttgctgatgcagtaaaagtgaccctgggcccgaaaggccgtaacgtagttctg
gacaagtctttcggctctccaactatcaccaaagatggtgtttcagttgcgcgtgagatc
gaactggaagacaagttcgagaacatgggtgcgcagatggttaaagaagttgcctctaaa
gcgaacgacgctgcgggtgacggtaccactactgcaactgtattggcgcaatccattatc
actgaaggcctgaaagcagttgcggccggcatgaacccaatggacctgaaacgcggtatc
gacaaagcagttatcgctgcggttgaagagttgaaaaaactgtctgtaccttgctctgat
tctaaagcaattgctcaggtagggaccatctctgcaaactcagactcaactgtgggtgag
ctgattgcacaagcgatggaaaaagtcggtaaagaaggcgttatcaccgttgaagaaggt
tcaggtctgcaagacgagctggatgttgtagaaggtatgcagttcgaccgtggctacctc
tctccttacttcatcaataaaccagaaactggttctattgaacttgaaagcccattcatc
ctgctggctgacaagaaaatctctaacatccgcgaaatgctgccagttctggaagccgta
gcgaaagccggtaaaccactgctgatcattgcagaagatgttgaaggcgaagctctggca
actctggtggttaacaccatgcgcggtattgttaaagttgccgctgttaaagcaccaggt
ttcggcgatcgtcgtaaagccatgctgcaagatatcgctaccctgactgcgggtaccgtt
atttctgaagagatcggtctggaactggaaaaaaccactctggaagatctgggtcaggcg
aaacgtgttgttatcaataaagacaccactatcatcatcgatggcgtaggcgacgaagcg
actattcagggccgtgttgctcagatccgtgctcaaatcgaagaagcgacttctgactac
gacaaagaaaaactgcaagagcgtgtcgctaaactggctggcggcgttgccgttatcaaa
gttggcgccgcaactgaagttgaaatgaaagagaaaaaagcgcgcgttgaagatgctcta
cacgcaactcgtgctgcggtagaagaaggcgtggttgctggtggtggtgtagcgctgatc
cgcgccgctcatgctctggctaatctgaaaggcgacaacgaagatcagaacgttggtatt
aaagttgctctgcgtgcgatggaatctccactgcgtcagatcgtggttaacgccggtgaa
gaagcttctgttatcgcaaataaagttaaagcgggcaaagatagcttcggttacaacgct
tacactgaagaatacggcgacatgatcgcgatgggtatcctggatccaactaaagtgact
cgttctgctctgcagtacgcagcctctattgctggcctgatgatcaccaccgagtgcatg
atcactgacctgccacgtgatgacaaaggtgctgatatgggcgctggcggcatgggtggt
atgggtggtatgggcggcatgatgtaa
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