Yersinia enterocolitica (type O 5) YE53/03: YE5303_32401
Help
Entry
YE5303_32401 CDS
T03739
Symbol
hyfR
Name
(GenBank) putative hydrogenlyase transcriptional activator
KO
K15836
formate hydrogenlyase transcriptional activator
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
yee03000
]
YE5303_32401 (hyfR)
Transcription factors [BR:
yee03000
]
Prokaryotic type
Helix-turn-helix
Other families
YE5303_32401 (hyfR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF_2
GAF
AAA_5
GAF_3
Mg_chelatase
AAA_2
AAA
HTH_8
AAA_16
AAA_19
TIP49
MCM
AAA_7
Motif
Other DBs
NCBI-ProteinID:
CCQ41288
LinkDB
All DBs
Position
complement(3202622..3204781)
Genome browser
AA seq
719 aa
AA seq
DB search
MDSAKKLLRPSLAQVWQDTLFTVSKKLLLLRDITDLVNELRKLSFSVVRFQRVNLLLLNP
LYNQMTLYTHDDVSDTVVASQNILFAEGPGGLAWQQQTPLQTDSHRMQREFSAVGDLAPY
QKLHAGCHFPLGHDNHWSGCVEFIKTDNSQFDEQAITFLGLLAEVVAIAVDNITEINRAF
SERERLRFERDHFRILVDVTNTVISKLELDVLAAEVSKEIHRFFNIDYISLAICGTHNDK
NKLNVFSTRYQSGKAVQHQQAWVDMTGTLAGQVLRSRELLLVNLADIALLAPDDKQLANM
LDAGLQAVCLLPLFFGHKMLGVLKLAQCQSDIFTDSNLKLLRQIAARIAIAVDNALAYNE
ITRLKDSLVNENLYLTDQIIHNEEFGEIVGHSAAIKAVLEQVEMVASSDCTVLILGETGT
GKELIARAIHNLSTRKNKRMVKMNCAAIPSGLMESDLFGHEKGAYTGAASQRIGRFEMAD
GGTLFLDEVGDIPLELQPKLLRVLQEREIERLGGSKIIPVDVRLIAATNRDLKLMMVNRE
YRSDLYYRLNVFPIVIPPLRERPEDIPLLVKFFTQKIAKRMNRTIDTIPGETLRLLSRLP
WPGNIRELENVIERAVILSRGTTLNLQLQELEYHLSPLEVAKPVLERAVHKPLLPESEEP
EFSESERARIIRVLRETNGVVAGPKGAAIKLGLKRTTLLSRMQRLGISVKSIEDEDGME
NT seq
2160 nt
NT seq
+upstream
nt +downstream
nt
atggatagcgcaaaaaaactactccgcccctcattggctcaagtctggcaagacacattg
ttcacggtatcgaaaaagttattattgctgcgggatataaccgatttagttaacgaactc
aggaaactctctttttctgtcgttcgtttccagcgggtcaatttattactgcttaacccc
ctgtataaccaaatgacgctctatacccatgacgatgtgtctgacactgttgtggcgtcg
cagaatattttatttgccgaaggccccggtggactggcctggcagcaacagacgcctttg
caaactgatagtcaccgtatgcaaagggagttttctgctgttggtgatttagcaccgtat
cagaaattacatgctggctgccatttccctttgggccatgataaccattggtcaggctgt
gttgagtttattaaaaccgataatagccagtttgatgagcaagctattacctttctgggg
ttattggcagaagtagtggccatcgctgtcgacaatattacggagataaaccgggcattc
tccgagcgcgaacggttgcgctttgaacgggatcatttccgtatattagtggatgtcacc
aatacggttatttctaaactggagttggatgtattagctgcggaggtctcaaaagagata
caccgctttttcaatattgattacatcagtttggcaatatgcggtacgcacaatgacaaa
aataaactgaatgttttttctactcgctatcagtctggtaaagcggtacagcatcaacaa
gcctgggtagatatgacgggcacattagccgggcaggttttacgcagccgggaattatta
ctcgtcaatctggctgatattgctcttttggctccggatgataaacaactggcaaatatg
ctggatgctggcttacaagcagtttgcctattgccactatttttcggtcataagatgctg
ggcgtattgaaattagcacaatgtcagagtgatattttcactgacagtaaccttaaactg
ttacgacaaatagccgcgcgaattgctattgcagtcgataatgccttggcttacaacgaa
attacccgcttgaaagattcattggttaatgaaaatctctatttgactgaccagattatt
cataatgaagagtttggtgagatagtgggtcacagcgcagctattaaagcagtgctggaa
caggttgaaatggtggcatccagtgactgtacagtattgattctgggggaaactggcacc
ggtaaagagttaattgcccgtgccatccataatttaagtacccgtaagaataaacgtatg
gtgaaaatgaactgtgcggccattccctccggtttaatggagagtgatctgtttggtcat
gaaaagggggcttataccggtgccgcctcacagcgtattggtcgttttgaaatggcggat
ggcggtacgttatttctcgatgaagttggggatatccctcttgaattgcaacctaagctc
ctgcgggttctacaagagcgagaaatagagcggctggggggcagtaaaattatcccagtt
gatgttaggttgattgccgcgactaaccgagatttaaaactgatgatggtaaatcgggaa
tatcgcagtgatctctattatcggcttaatgtttttccaattgtgatcccaccgttgcgt
gaacgtcctgaagatatccctttgttagtgaaatttttcactcagaaaatagccaaacgc
atgaaccgcactattgataccattccgggtgagacattgcgtttactcagccgcctacct
tggccgggtaatattcgcgaactggaaaatgttattgagcgggcggtgatcctcagccgt
ggcaccacgctaaatttacagttacaagaactggaatatcatttatcgccattagaagtg
gcgaaacctgtattggagcgagcggttcacaaaccattattacctgagagtgaagagcca
gagttttcagaatctgaacgtgcgcgaattattcgggtattacgagaaaccaatggtgta
gtcgccgggccgaaaggagccgcaattaagttagggttgaaacgcaccacactgttatcc
cgcatgcagcggttaggaatctcagtaaaaagtatcgaagacgaagatgggatggaataa
DBGET
integrated database retrieval system
