Yersinia enterocolitica (type O 5) YE53/03: YE5303_35561
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Entry
YE5303_35561 CDS
T03739
Symbol
dnaX
Name
(GenBank) DNA polymerase III subunit Tau (contains DNA polymerase III subunit Gamma)
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03030
DNA replication
yee03430
Mismatch repair
yee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YE5303_35561 (dnaX)
03430 Mismatch repair
YE5303_35561 (dnaX)
03440 Homologous recombination
YE5303_35561 (dnaX)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yee03032
]
YE5303_35561 (dnaX)
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_35561 (dnaX)
Enzymes [BR:
yee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YE5303_35561 (dnaX)
DNA replication proteins [BR:
yee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
YE5303_35561 (dnaX)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
YE5303_35561 (dnaX)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_tau_5
DNA_pol3_delta2
DNA_pol3_gamma3
DNA_pol3_tau_4
AAA
AAA_22
RuvB_N
AAA_5
AAA_18
AAA_30
AAA_2
PIF1
ResIII
AAA_14
AAA_16
AAA_assoc_2
AAA_7
TsaE
nSTAND3
AAA_19
Motif
Other DBs
NCBI-ProteinID:
CCQ41605
LinkDB
All DBs
Position
complement(3559537..3561507)
Genome browser
AA seq
656 aa
AA seq
DB search
MSYQVLARKWRPKTFADVVGQEHVLTALANGLSLGRIHHAYLFSGTRGVGKTSIARLLAK
GLNCETGITATPCGTCANCLEIEQGRFVDLIEIDAASRTKVEDTRELLDNVQYAPARGRF
KVYLIDEVHMLSRHSFNALLKTLEEPPAHVKFLLATTDPQKLPVTILSRCLQFHLKVIDV
EVIRAQLEKILLAEQISSDARALQLLARAADGSMRDALSLADQAIAMGDGHVTTATVSQM
LGTLDDEQPLAIIEALVSADGARVMAQLEQAASRGVDWENLLVETLSLLHRIAMVQLLPS
MLDNHYATIEPRLRELARTLPPTDIQLYYQTLLVGRKELAYAPDRRMGVEMTLLRALAFH
PKAIIAEPQRVPVSAPAAIADNTPAPQQHFQAPSSTQHAPQHEAPPLGATASVNTELPDA
TAQLLQARTQLLRKSGTTPPKKNEPAAPGKARPVNSALERLASVTERSQQRLAAKSTEEK
KPAKKEAYRWTAQNQPEVPAEPVATPKALRSALEHEKTPELSAKLAQEAMVRDPWAAEID
KLHIPKLVQQLALNAFKEEIEPGNIRLHLRSAQRHLNSPSAQKTLADALSELHGNTVTLS
VIEDDNLAERTPLEWRQAIYEEKLAQARQSIIADNNIQTLRRFFDAELDEESIRPV
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
atgagctatcaggtccttgcccgtaagtggcgccccaaaacgtttgccgacgtcgttggt
caggaacatgtcctgacggcgttggctaatggcctttcattagggcgaattcatcacgcc
tatttattttctggcacccgtggggtaggtaagacctctattgcccggttgttagccaaa
ggcctcaactgcgaaacgggcattactgccaccccttgtggcacctgtgcaaattgcctg
gaaatcgagcaaggtcgttttgttgatctgatcgaaatcgatgcggcttcgcgcactaaa
gtcgaagatacccgcgaactgctggataatgtccaatatgcgccggctcgtggccgcttc
aaagtctatttgatcgatgaagtgcacatgttgtcacggcacagtttcaatgccttgttg
aaaactcttgaagaaccgccagcccatgtgaaattcctgctggcgacaaccgatccgcag
aagttacccgtcaccatactttctcgctgtttgcagtttcacctaaaggtcattgatgtt
gaggtgattcgtgcccagctcgaaaaaatactgttagccgagcaaatcagtagtgatgcc
agagcattgcaattactggcgcgcgctgctgatggcagtatgcgcgatgcgctcagtttg
gctgatcaggccatcgcgatgggggatggtcatgtcactaccgccactgtcagccaaatg
ttgggaacattggatgacgaacaaccgctggcgattattgaagcgttagtgagtgccgat
ggcgcacgcgtgatggcccagcttgagcaagcggcatcacgcggtgttgactgggaaaat
ctattagtcgaaaccttaagtttgctgcaccgcattgcgatggtgcagttattgccctcc
atgctggataatcactacgcgactattgagccgcgattacgcgagttggcgcggacactg
ccgccgacagatatccaactgtactaccagacattgctggtggggcgaaaagagttagca
tatgcccctgaccgccgcatgggggtcgaaatgactttattgcgtgccttggcgtttcac
cctaaagcgataattgccgagccacagagggtgccagttagtgctcctgcggcgatagcg
gataatacaccagcgccgcagcaacattttcaggctccgtcatctacccaacatgcgcca
cagcatgaggccccgccattaggtgccactgcgtcggttaacaccgagcttccagacgct
accgcgcaattgctgcaagcacgcacgcagttactgcgcaagtcggggacgaccccacca
aaaaagaatgagccggcagcgccaggaaaagcgcggccggtaaactcagcgctggagcgt
ttagcttcggtgactgagcgcagccagcagcgcctggccgccaaatccacggaagagaag
aaaccggcgaagaaagaagcttatcgctggactgcgcagaatcagccagaggtgccagca
gagccggtagcgacaccaaaagcattgcgatcggcattggagcatgaaaaaacgccggaa
ctttctgctaaattggctcaagaagcgatggtacgcgatccttgggcagcagaaattgat
aaattacacattcccaaattggtgcaacaacttgcgctgaatgcatttaaagaagaaata
gaaccgggtaatattcgccttcacctgcgttctgctcagcgccatttaaactcgccctcg
gcacaaaagacgttggcagacgcattgagtgaattacacggtaatacagtcacactaagt
gttatcgaagatgataatctggcggagcgtaccccgttagagtggcggcaggccatttat
gaagaaaagctggcacaagcacgccagtcaattattgcggataataatattcagacgctg
cgtcgtttcttcgacgccgaactggatgaagaaagtatccgaccggtttaa
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