Yersinia enterocolitica (type O 5) YE53/03: YE5303_36411
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Entry
YE5303_36411 CDS
T03739
Symbol
sbcD
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_36411 (sbcD)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
YE5303_36411 (sbcD)
Archaeal homologous recombinant proteins
YE5303_36411 (sbcD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
FBPase_2
PRORP
Motif
Other DBs
NCBI-ProteinID:
CCQ41690
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All DBs
Position
3652004..3653242
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AA seq
412 aa
AA seq
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MRIIHTSDWHLGQNFFTKSRAAEHQAFLRWLIEQIKENQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVELQSTNCQLVVLGGNHDSVSTLNESRGLLSYLNTTVISCASSNLDQQVIMLK
DRQNHPAALLCAIPFLRPRDLVTSQAGESGGQKQLALQEAIAAHYQALYQRAIELRTELG
LPLPIIATGHLTTVGVTTSDSVRDIYIGTLDAFPAHAFPPADYIALGHIHRAQQVAKTEH
IRYSGSPIALSFDELSKEKSVYLVEFAQQTLASVTPIFIPQFQPMQLIKGDLAQIEQQLT
KFSDHQGLPVWLDIEVATQDYLTDIQRRIQALAAELPVEVVLLRRSKEQRNNSIERQEKE
TLNELSVTDVFERRLALEADLAEPRQERMRQMFNLVVEDITQGKDTAEEQSA
NT seq
1239 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattattcatacctctgactggcatttgggccaaaatttctttaccaaaagccgt
gcggctgaacatcaggcattcctgcgctggctcatagaacagatcaaagaaaatcaggta
gatgcgctgattgtggcgggtgatatttttgataccggctccccacccagttatgcacgt
gagctatataaccgtttcgtagttgaactacaatcaacgaactgtcagttggttgttctg
gggggcaaccatgattcagtatcaacgctgaatgaatctcgcggcttgctttcttatttg
aataccacagtcatttcctgcgccagcagcaatctggatcaacaggttattatgttgaaa
gaccgccaaaatcaccctgcggcactgctgtgcgcgattccctttttacgtccacgggat
ctggtcaccagccaggcgggtgaatccggtggacagaaacagctggcgttacaggaagca
attgctgcccactatcaggcgctctaccagcgagccatcgagctgcgtaccgagttaggc
ctgcccttgccgattattgctaccgggcacctcactacggtgggggtcactacctcggac
tcggttcgtgatatttatattggcacattggatgctttcccggcccacgctttcccccca
gcagattatattgctctgggccatattcaccgtgctcagcaagtagcaaaaaccgaacat
atccgttatagcggctcgccaattgccctgagttttgatgagctgagcaaagagaaaagt
gtttatctggtggagtttgcccagcagacattagcctcagtgaccccaatcttcatccca
caatttcagccaatgcaattaatcaaaggcgacttagcgcaaattgagcaacagttgact
aaattttccgaccaccaggggttaccggtgtggctggatatcgaagttgccacacaagat
tatctcactgatattcaaagacgaattcaggcattagccgcagaactccccgttgaggtg
gtactcttacgccgcagcaaagaacagcgtaataacagtattgagcggcaggaaaaggaa
acactcaatgaactgagtgtcactgatgtatttgaacgccggctggcgctagaggcggat
ttagccgaaccacgccaagagcgcatgcgacagatgtttaatctggtggttgaagatatc
acacaaggtaaagataccgcagaggagcaatctgcatga
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