Yersinia enterocolitica (type O 5) YE53/03: YE5303_37981
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Entry
YE5303_37981 CDS
T03739
Symbol
nirB
Name
(GenBank) nitrite reductase
KO
K00362
nitrite reductase (NADH) large subunit [EC:
1.7.1.15
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00910
Nitrogen metabolism
yee01100
Metabolic pathways
yee01120
Microbial metabolism in diverse environments
yee01310
Nitrogen cycle
Module
yee_M00530
Dissimilatory nitrate reduction, nitrate => ammonia
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09100 Metabolism
09102 Energy metabolism
00910 Nitrogen metabolism
YE5303_37981 (nirB)
Enzymes [BR:
yee01000
]
1. Oxidoreductases
1.7 Acting on other nitrogenous compounds as donors
1.7.1 With NAD+ or NADP+ as acceptor
1.7.1.15 nitrite reductase (NADH)
YE5303_37981 (nirB)
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Gene cluster
GFIT
Motif
Pfam:
Pyr_redox_2
Fer2_BFD
NIR_SIR
Pyr_redox
NIR_SIR_ferr
Rubredoxin_C
Pyr_redox_3
GIDA
AlaDh_PNT_C
DUF7661
FAD_binding_3
Motif
Other DBs
NCBI-ProteinID:
CCQ42505
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Position
4604842..4607388
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AA seq
848 aa
AA seq
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MSKVKLAIIGNGMVGHRFIEDLLDKADKDQFEITVFCEEPRIAYDRVHLSSYFSHHTAEE
LSLVREGFYEKHGVKVLVGERAITINRKEKVIHSNSGRTLYYDKLIMATGSYPWIPPIKG
SEGQDCFVYRTIEDLNAIEACTRRSKRGAVIGGGLLGLEAAGALKSLGVETHVIEFAPVL
MAEQLDPMGGDQLRQKIERMGVRVHTGKNTQEIVHSGQNSRKTMLFADGTQLEVDFIVFS
TGIRPQDKLAHQCGLATARRGGIAINDYCQTSDPDVYAIGECASWQERTFGLVAPGYKMA
QVTADHLLGRENTFQGADMSAKLKLLGVDVGGIGDAHGRTEGARSYVYLDESKEIYKRLV
VSADNKKLLGAVLVGDTSDYGNLLQLALNNIELPENPDSLILPAHAGSKPAMGVDSLPDT
AQICSCFDVTKSDIIQAIGQGCHTVAALKSATKAGTGCGGCIPLVTQVLNAELSKQGIEV
NHHLCEHFAYSRQELYHLIRVEGIKSFDALLEKYGKGYGCEVCKPTVGSLLASCWNEYIL
EPQHTPLQDTNDNFLGNIQKDGTYSVIPRSPGGEITPDGLLAIGRIAKQYNLYTKLTGSQ
RVGMFGAQKDDLPAIWAQLIEAGFETGHAYAKALRMAKTCVGSTWCRFGVGDSVGFGVAL
EHRYKGIRTPHKMKFGVSGCTRECSEAQGKDVGIIATENGWNLYVCGNGGMKPRHADLLA
ADLDEETLMRYLDRFMMFYIRTADKLQRTSVWLESLEGGINYLRAVILDDKLGINDQLEA
DIARLRDKVTCEWKVTVENPAAQVRFAHFINSPLRDPNVQVVPEREQHRPARPDERIPVR
VLELEDNL
NT seq
2547 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaagtcaaacttgccatcatcggcaacggtatggtcggccaccgctttattgaa
gacttattagataaagcagataaagaccaatttgagataaccgtcttttgcgaagaaccg
cgcatcgcttatgaccgggttcatctttcttcttacttctcccaccacactgcggaagaa
ctgtcattagttcgcgaaggtttttatgaaaagcacggcgtcaaagtgctggttggcgaa
cgcgccataaccattaaccgcaaagagaaagtcatccactccaacagcggccgtactcta
tattacgacaagctgattatggcgaccggctcctatccgtggatcccgccgattaaaggc
agcgaagggcaagactgctttgtttaccgcaccattgaagatttaaatgccattgaagct
tgcacccgtcgcagtaaacgcggggcagtcattggtggcggattattagggttggaagcc
gctggcgcactgaaaagcctcggtgttgagactcatgtcattgagtttgctccagtatta
atggcagaacagcttgacccaatgggcggtgaccaactgcgccagaaaattgagcgcatg
ggcgtcagagtgcataccggcaaaaatacgcaagaaattgtccatagcgggcaaaacagc
cgcaaaaccatgctgtttgccgatggcacccagttggaagtcgattttatcgtcttctcc
accggtattcgcccacaagacaaactggctcaccaatgcggtttagccacagcgcgccgt
ggtggtattgctattaatgattattgccaaacctccgacccggatgtgtacgccattggc
gagtgtgcatcatggcaagagcggactttcgggctggtcgcaccgggttacaaaatggcc
caggtgacggctgaccatttactggggcgcgaaaataccttccagggcgcggacatgagc
gccaaactcaagctcctcggtgtagacgtcggcgggattggtgatgcccacggtcgcact
gaaggcgcacgcagctatgtttatctcgatgaaagcaaagagatttacaagcgtctggtg
gtcagcgccgacaacaaaaaactgctcggggcggtgctggtcggtgataccagcgattac
ggtaatctgctgcaattagcactgaataatattgagctaccggaaaaccccgacagcctg
attttgccagcccatgcgggcagtaaaccagcgatgggggttgattccctgccggatacc
gcacaaatctgttcctgttttgatgtcaccaaaagcgacattattcaagccatcggccag
ggttgccataccgtagcagcgcttaaatcggcgacgaaagccggtaccggttgcggcggc
tgcattcccttagtgacccaagtgttgaatgccgaactcagcaagcaaggcattgaagtt
aatcatcatttgtgtgagcacttcgcgtattcacgtcaagagctatatcacttgatccgt
gtcgaagggattaaaagctttgatgccttgctggaaaaatatggcaaaggttatggctgt
gaagtatgtaaaccgacggtgggttcactgctggcatcctgctggaatgaatatatattg
gagccgcaacacaccccgttgcaggataccaacgacaatttcctcggcaatatccaaaaa
gacggcacttactcggttatcccgcgctcaccgggtggggaaattacgcctgatggtctg
ctggccattggccgcatcgccaaacaatataatctctacaccaaactgaccggctcacag
cgcgtcgggatgtttggcgcacaaaaagacgatctcccggctatttgggcgcagttgatt
gaagcgggctttgagaccggacacgcctatgccaaagcactacgtatggcaaaaacctgt
gtcggtagcacctggtgccgctttggggttggcgatagcgtcggcttcggtgtcgcactg
gaacaccgctacaaaggcatccggacaccacacaaaatgaaatttggtgtttccggctgt
acccgcgaatgttcagaagcacagggtaaagatgtcgggattatcgccaccgaaaacggc
tggaacctgtatgtctgcggtaacggcgggatgaaaccacgtcatgcggacttactggca
gcggatctggatgaagaaaccctgatgcgctatctcgaccgctttatgatgttctacatc
cgcaccgccgataaactgcaacgcacctcggtgtggctggaaagtctggaaggtggaatt
aactatctacgcgccgtcattctcgatgacaaactgggcattaacgaccagctagaagcg
gatattgctcgcctgcgcgataaagtcacctgcgaatggaaagtcaccgtcgaaaacccg
gctgcgcaagtccgtttcgcccactttatcaacagcccactacgtgacccaaatgtacaa
gtagtgcctgaacgtgaacaacatcgcccggcccgtccggatgaacgcatccctgttagg
gtgctggaactggaggataacttatga
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