Yersinia enterocolitica (type O 5) YE53/03: YE5303_40251
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Entry
YE5303_40251 CDS
T03739
Symbol
acrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yee03032
]
YE5303_40251 (acrB)
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_40251 (acrB)
Enzymes [BR:
yee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
YE5303_40251 (acrB)
DNA replication proteins [BR:
yee03032
]
Prokaryotic type
DNA Topoisomerases
YE5303_40251 (acrB)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
YE5303_40251 (acrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
GyrB_insert
DNA_gyraseB_C
Toprim
HATPase_c
GyrB_hook
HATPase_c_3
Toprim_4
DUF6865
Motif
Other DBs
NCBI-ProteinID:
CCQ42733
LinkDB
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Position
complement(4894337..4896751)
Genome browser
AA seq
804 aa
AA seq
DB search
MSNTYDSSSIKVLKGLDAVRKRPGMYIGDTDDGTGLHHMVFEVVDNAIDEALAGHCKEII
VTIHSDNSVSVQDDGRGIPTGMHDEEGVSAAEVIMTVLHAGGKFDDNSYKVSGGLHGVGV
SVVNALSEKLELVIRREGKVHEQTYKMGVPQAPLKVVGETDQTGTTVRFWPSFQTFTNNT
EFQYEILAKRLRELSFLNSGVSIKLKDKRNDKEDHFHYEGGIKAFVEYLNKNKNPIHPKV
FYFSTMKDDIGVEVALQWNDGFQENIYCFTNNIPQRDGGTHLVGFRTAMTRTLNSYMDKE
GYSKKAKISATGDDAREGLIAVVSVKVPDPKFSSQTKDKLVSSEVKTAVETLMNEKLVEY
LLENPTDAKIVVGKIIDAARAREAARKAREMTRRKGALDLAGLPGKLADCQERDPALSEL
YLVEGDSAGGSAKQGRNRKNQAILPLKGKILNVEKARFDKMLSSQEVATLITALGCGIGR
DEYNPDKLRYHNIIIMTDADVDGSHIRTLLLTFFYRQMPEIIERGHVFIAQPPLYKVKKG
KQEQYIKDDDAMEQYQMTLALDGAALHINADAPPLVGEHLEKLVAEHYSVQKTIARMERR
YPRALLNNLIYQPTLKEEDLSDKEAVTQWIDSLVVMLNEKEQHGSSYSSVVRENRERQLF
EPVLRIRTHGVDTDYDLDFDFIHGGEYRKICLLGDKLRGLIEEGAFVERGERRVPVSSFE
DALDWLVKESRRGLAIQRYKGLGEMNPEQLWETTMDPTSRRMLRVMVKDAIAADQLFTTL
MGDAVEPRRAFIEENALRAANIDI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaatacttatgactcctcaagtatcaaggtattaaaagggctggatgcggttcgt
aagcgtccgggcatgtatatcggtgatactgatgacggtaccggtctgcaccacatggta
ttcgaggttgtggacaacgctatcgacgaagccctcgctggccactgtaaagaaattatc
gtcaccatccactcggataactctgtttctgtacaggatgatggccgtggtatcccaacc
ggtatgcatgacgaggaaggggtatcggcagctgaggtcatcatgaccgtgttgcatgct
ggcggtaagtttgacgataactcgtacaaagtttccggtggtttgcacggcgtaggtgta
tccgttgttaacgccctgtctgaaaaactggagctggtgattcgccgtgaaggtaaagtt
cacgagcagacttacaagatgggtgtgccgcaggcaccattgaaagtggtgggcgaaacc
gatcaaaccgggacaaccgtgcgtttctggccgagcttccagacgttcaccaataatacc
gaattccaatatgaaatcctggcaaaacgtctgcgtgagttgtcgttcctgaactccggg
gtttcaatcaagctgaaagacaaacgtaacgacaaagaagaccacttccattacgaaggc
ggtatcaaagcgtttgttgaatatctgaacaaaaacaaaaacccgatccacccgaaagtg
ttctatttctccaccatgaaagatgatatcggtgtagaagtggcattacagtggaacgat
ggtttccaggagaatatttactgtttcaccaacaacattccacagcgcgatggggggact
cacttagtcgggttccgtacggcgatgacccgtaccctgaacagctacatggataaagaa
ggttacagtaaaaaagcgaaaatcagtgcgaccggtgatgatgcccgtgaaggcttgatt
gctgtggtttccgtgaaagtgccagaccctaaattctcctcacagaccaaagataaactg
gtttcttctgaggtaaaaactgcggtcgaaacgctgatgaacgagaagctggttgagtat
ttgctggaaaacccaaccgacgccaaaatcgtggttggcaaaattattgacgcggcccgt
gctcgtgaagctgcgcgtaaagcccgtgaaatgacacgccgtaaaggtgcgctggatttg
gctggcttaccaggcaaattggctgactgtcaggaacgtgacccagcattgtccgaactc
tacttagtggaaggggactctgcgggcggttctgcgaaacaaggccgtaaccgtaaaaat
caggctattttgccgctgaaaggtaaaattctgaacgtcgagaaagcgcgttttgacaaa
atgctttcttcgcaggaagtggcaacactgatcaccgcgttgggttgtggtattggacga
gatgaatataacccggacaaattgcgttatcacaatatcattatcatgaccgatgccgac
gtggatggttctcacatccgtacgttattgttgaccttcttctaccgccagatgccggaa
attattgagcgtggtcatgtatttatcgctcagccgccactgtataaagtgaaaaaaggt
aaacaagagcaatacatcaaagatgatgacgcgatggagcagtatcagatgactctggca
ctggatggcgcggctctgcatatcaatgccgatgcaccaccactggtgggcgaacatctg
gagaaactggttgccgagcactatagcgtccagaaaactatcgctcgtatggaacgtcgt
tatccgcgtgctttactgaataacctgatttatcagccaaccttgaaagaagaggatttg
agcgataaagaggcagtaacgcaatggattgattcgctggtggtcatgctaaacgagaaa
gaacagcatggcagcagctatagttctgtggtgcgcgaaaaccgtgagcgtcagctgttt
gagccggtattgcgtattcgtacccacggggttgataccgattatgatctggacttcgat
tttatccacggtggtgaatatcgcaagatctgtctgttgggcgacaagttgcgcggctta
atcgaagaaggtgcttttgttgaacgtggcgagcgccgtgtgccggtttcaagcttcgaa
gatgcactggactggctggttaaagagtcgcgtcgtggtctggcaatccagcgctataaa
ggtctgggtgaaatgaatccagagcaactgtgggaaaccactatggatccaaccagccgc
cgtatgttgcgggtgatggtgaaagatgcgattgcggcagaccagttgtttaccactctg
atgggcgatgcggttgaacctcgtcgtgcctttatcgaagagaatgcgttgcgagcagca
aatatcgatatctaa
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