Yersinia enterocolitica (type O 5) YE53/03: YE5303_40331
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Entry
YE5303_40331 CDS
T03739
Symbol
thdF
Name
(GenBank) putative thiophene and furan oxidation protein
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yee03016
]
YE5303_40331 (thdF)
Transfer RNA biogenesis [BR:
yee03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
YE5303_40331 (thdF)
Prokaryotic type
Methyltransferases
YE5303_40331 (thdF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
AIG1
Ras
ABC_tran
Roc
AAA_28
Arf
SRPRB
Gtr1_RagA
Motif
Other DBs
NCBI-ProteinID:
CCQ42741
LinkDB
All DBs
Position
4903614..4904978
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AA seq
454 aa
AA seq
DB search
MSTTDTIVAQATPPGRGGVGILRVSGRAAATVAQAVLGKLPKPRYADYLPFKDVDGSTLD
QGIALYFPGPNSFTGEDVLELQGHGGPVILDLLLKRILALPGLRIARPGEFSERAFLNDK
LDLAQAEAIADLIDASSEQAARSAVNSLQGAFSVRIHQLVEALTHLRIYVEAAIDFPDEE
IDFLSDGKIEGQLNGVMADLEQVRTEARQGSLLREGMKVVIAGRPNAGKSSLLNALAGRE
AAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEVERIGIERAWHEIEQADRVL
FMVDGTTTDATEPAAIWPEFMARLPATLPITVVRNKADITGETLGLTEVNGHSLIRLSAR
TGEGIDLLRNHLKQSMGFTSNTEGGFLARRRHLQALETAAQHLAQGHEQLVSAYAGELLA
EELRLAQQSLSEITGEFSSDDLLGRIFSSFCIGK
NT seq
1365 nt
NT seq
+upstream
nt +downstream
nt
atgagcaccactgatactatcgtggcacaagcaacacctccaggccgtggtggcgttggt
attttacgtgtttcaggtcgcgctgccgccacggttgcgcaagcagttttggggaaatta
cccaagccacgctatgccgattacctaccgtttaaagatgtcgatggcagcaccttggac
caaggtatcgcactctactttcctggcccaaattccttcactggcgaagacgtactggaa
ctacaaggtcatggtggcccagtcatactagatttgctgttaaaacgcattctggccctg
ccagggctgcgtattgcacgtccaggagagttctctgagcgcgcattcttaaacgacaag
ctggatctggcacaagcagaagctattgctgatctcattgatgccagctcagagcaagca
gcacgctcggcagtgaattcattacagggcgcattttcagtccgtatccatcaattggtg
gaagcacttactcacttgcgaatctacgtcgaagctgcgattgacttcccagatgaagaa
attgatttcctgtctgatggcaagattgaaggtcagttgaatggggtgatggcagatttg
gaacaagtgcgcactgaagcccgacaaggcagtttgctgcgcgaagggatgaaagtggtc
attgccggccgaccgaatgctggaaaatcaagtttactcaatgcgttagcgggacgtgaa
gccgcaattgtcaccgatattgccggcaccactcgtgatgtgttgcgagaacatattcat
atcgatgggatgccattgcatataattgatacagcaggcctacgggaagccagtgacgaa
gttgagcgcattggtatcgaacgtgcgtggcatgagattgaacaagctgatcgggtgcta
tttatggttgatggcactaccaccgacgccactgaaccggcggctatctggccagagttt
atggcgcgcttgcctgctacactgccgatcaccgtggtacgtaataaagctgacattaca
ggcgaaaccttaggtctgaccgaagtaaatggtcactcactaattcgcttgtcagcccga
accggtgaaggcattgacctgctgcgtaaccatctcaaacagagtatgggctttaccagc
aacaccgaaggcggtttcctggcccgccgccgtcatttgcaagcactggaaacagccgca
cagcatctggcacaaggtcacgaacagttagtaagcgcttacgctggtgagttactggcg
gaagaattacgtttagcacaacagtcattgagcgaaattaccggtgaatttagctctgat
gacttactggggcggattttctccagtttctgtattggaaaatga
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