Yersinia enterocolitica (type O 5) YE53/03: YE5303_41101
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Entry
YE5303_41101 CDS
T03739
Symbol
mmrA
Name
(GenBank) putative DEAD-box helicase
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YE5303_41101 (mmrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yee03019
]
YE5303_41101 (mmrA)
Enzymes [BR:
yee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
YE5303_41101 (mmrA)
Messenger RNA biogenesis [BR:
yee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
YE5303_41101 (mmrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
ERCC3_RAD25_C
AAA_22
CCDC138_C
ResIII
Motif
Other DBs
NCBI-ProteinID:
CCQ38578
LinkDB
All DBs
Position
complement(205733..206809)
Genome browser
AA seq
358 aa
AA seq
DB search
MLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYGGDGYDKQLKV
LESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIRWLFRRMPSVD
KRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIQEELFYPSNEEKMRLLQTL
IEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILEDFTKGDLDIL
VATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLACEEYALNLPA
IETYTGHSIPVSKYNSDVLLTDLPAPKRLARTRTGNGPRRNSAPRRSGAPRNNRKRPS
NT seq
1077 nt
NT seq
+upstream
nt +downstream
nt
ttgctttctcaccccgcagaagagggtcgtcagactaatcaaccgcgcgcattgattatg
gcaccaacgcgtgaattagctgtgcaaattcactccgatgcagagtcactttcccaagta
accggcctgaaattaggtttggcttatggtggtgacggctacgacaaacagcttaaagtg
ctggaaagtggcgtagatattcttatcgggactactggccgtttaatcgattacgcaaaa
caaaattatattaatctcggtgcgattcaggttgtggtattggatgaagctgatcggatg
tacgatttaggctttattaaagatatccgctggctgttccgccgtatgccttccgttgat
aagcgtttaaacatgctgttctctgccacactttcgtaccgcgtacgtgaattggctttc
gaacaaatgaacaacgccgaatatgttgaagtggaaccgttacaaaaaaccggccaccgc
attcaggaagagctgttctacccttcaaatgaagaaaaaatgcgtctacttcagacgttg
attgaagaagagtggccagatcgctgcattatttttgccaataccaaacatcgttgtgaa
gaaatctggggccacctggctgccgatggtcatcgtgtcggtctattgaccggtgatgtc
gcacagaaaaaacgcctgcggattttagaagatttcaccaaaggtgatttggatatcttg
gttgcaactgatgttgctgctcgtggtttgcatattccgctggtaacccacgtctttaac
tatgacctgcctgatgattgtgaagactatgttcaccgcattggccgtaccggtcgtgct
ggcgaaagtggtcattccatcagcctggcctgtgaagaatacgcattaaacttaccggct
atcgagacctataccggtcatagcattccggtgagtaaatataatagcgatgtgttatta
actgatttgccggcgccaaaacgtctggcccgtacccgcaccgggaatggcccacgtcgt
aactctgccccacgtcgcagtggtgcaccacggaataaccgtaagcgaccgagctga
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