Yersinia enterocolitica (type O 5) YE53/03: YE5303_41121
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Entry
YE5303_41121 CDS
T03739
Symbol
nitA
Name
(GenBank) transcription termination factor
KO
K03628
transcription termination factor Rho
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
YE5303_41121 (nitA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yee03021
]
YE5303_41121 (nitA)
03019 Messenger RNA biogenesis [BR:
yee03019
]
YE5303_41121 (nitA)
Transcription machinery [BR:
yee03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
YE5303_41121 (nitA)
Messenger RNA biogenesis [BR:
yee03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
YE5303_41121 (nitA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
AAA_25
AAA_22
S1CSD-TOTE-2
AAA
FtsK_SpoIIIE
Motif
Other DBs
NCBI-ProteinID:
CCQ38580
LinkDB
All DBs
Position
207950..209209
Genome browser
AA seq
419 aa
AA seq
DB search
MNLTELKNTPVSDLITLGENMGLENLARMRKQDIIFSILKQHAKSGEDIFGDGVLEILQD
GFGFLRSADSSYLAGPDDIYVSPSQIRRFNLRTGDTVAGKIRPPKEGERYFALLKVNEVN
YDKPENARNKILFENLTPLHANSRLRMERGNGSTEDLTARVLDLASPIGRGQRGLIVAPP
KAGKTMLLQNIATSIAYNHPDCVLMVLLIDERPEEVTEMQRLVKGEVIASTFDEPASRHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPASGKVLTGGVDANALHRPKRF
FGAARNVEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGTRKEELLTTTEELQKMWILRRILHPMGEIDAMEFLISKLATAKTNDQFFDNMRRS
NT seq
1260 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttaccgaattaaagaacacgccggtttctgatctgataacacttggcgaaaat
atggggctggaaaacctggcccggatgcgtaaacaagatattattttctctatccttaag
cagcacgcgaaaagtggagaagatatcttcggtgacggtgtgttggagatattgcaggat
ggatttggtttcctccgttctgcagacagctcctacctcgccggtcctgacgacatctac
gtatccccaagccaaattcgccgtttcaacctccgtactggtgataccgttgccggtaag
attcgtccacctaaagaaggtgagcgttactttgccttgttgaaagttaacgaagttaac
tatgacaaaccggaaaatgcccgtaacaaaatcctcttcgaaaacttaaccccattacat
gccaactctcgtttgcgcatggaacgtggtaacggttcgactgaagatttaactgctcgc
gtccttgatttggcatcgccaatcggtcgtggtcagcgtgggctgattgttgctccgcca
aaagcgggtaaaaccatgctgttgcagaatattgcgaccagcattgcttacaatcaccct
gattgcgtattgatggtactgctgattgacgagcgcccggaagaagtgaccgagatgcaa
cgtctggttaaaggtgaagttattgcttccaccttcgacgagccagcatctcgccacgtt
caagttgctgaaatggttatcgagaaagcgaaacgtctggttgagcataaaaaagacgtt
atcatcttactggattccattacccgtttggcccgcgcatacaacaccgtggtacctgct
tcaggtaaagtgctgaccggtggtgtggatgctaacgccttgcatcgtccaaaacgcttc
tttggtgccgcacgtaatgttgaagagggcggtagcctgactatcattgccaccgcgttg
gttgataccggttctaaaatggatgaagttatctatgaagaatttaaaggtaccggcaac
atggaactgcacttgtcgcgcaaaattgcagagaagcgtgtgttcccagccattgatttc
aaccgctctggtacacgtaaagaagagctgctgacaaccacagaagagttgcaaaaaatg
tggatcttacgtcgtatccttcacccaatgggtgaaatcgatgcaatggagttcctcatc
agcaaattggcaacagcgaaaaccaacgatcagttcttcgataacatgagacgttcgtag
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