Yersinia enterocolitica (type O 5) YE53/03: YE5303_41331
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Entry
YE5303_41331 CDS
T03739
Symbol
dapF
Name
(GenBank) diaminopimelate epimerase
KO
K01778
diaminopimelate epimerase [EC:
5.1.1.7
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00300
Lysine biosynthesis
yee00470
D-Amino acid metabolism
yee01100
Metabolic pathways
yee01110
Biosynthesis of secondary metabolites
yee01120
Microbial metabolism in diverse environments
yee01230
Biosynthesis of amino acids
Module
yee_M00016
Lysine biosynthesis, succinyl-DAP pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
YE5303_41331 (dapF)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
YE5303_41331 (dapF)
Enzymes [BR:
yee01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.7 diaminopimelate epimerase
YE5303_41331 (dapF)
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DAP_epimerase
PhzC-PhzF
CntK_N
Motif
Other DBs
NCBI-ProteinID:
CCQ38601
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All DBs
Position
233901..234725
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AA seq
274 aa
AA seq
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MQFSKMHGLGNDFMVVDAVTQNVYFSPELIRRLADRHTGVGFDQMLVVEPPYDPELDFHY
RIFNADGSEVSQCGNGARCFARFVRLKGLTNKRDISVSTQTGRMILSVTEDELVCVNMGE
PNFEPQSVPFRAAKAEKTYILRAAEHTVLCGVVSMGNPHCVMQVDDVSVANVALLGPVLE
SHERFPERANIGFMQVVSREHIRLRVYERGAGETQACGSGACAAVAIGIQQELLGEEVHV
ELPGGSLHISWKGPGHPLYMTGPATHVYDGFIHL
NT seq
825 nt
NT seq
+upstream
nt +downstream
nt
atgcagttctccaaaatgcacggtcttggcaacgactttatggttgtcgatgcagttacc
caaaatgtttacttttcgccggagttgatccgccgattagcagaccggcacactggcgtg
ggctttgatcaaatgttggtggttgagccaccttatgatcctgagctggattttcactac
cgtatttttaatgccgatggcagcgaagtctctcagtgtggcaatggcgcgcgctgtttt
gcccgttttgtccgactgaaagggctgaccaataaacgcgatatcagtgtcagcacccaa
accggtcgtatgatattgagtgtgactgaagacgaactggtgtgcgtcaatatgggcgaa
cccaatttcgaaccgcagagtgttcctttccgtgcggctaaagctgaaaaaacctacatt
ttgcgtgccgccgagcacaccgtgttatgtggtgtcgtttcgatgggcaatcctcattgt
gtgatgcaggttgatgatgtttcggttgccaatgttgccttgctaggcccagtattagaa
agtcatgagcgctttcccgaacgggctaatatcggctttatgcaggttgtgagccgtgaa
catatccgcttgcgggtgtatgagcgcggagccggtgaaactcaggcttgtggtagcggg
gcttgtgcggccgtggcgattggtattcagcaagaattgttgggtgaagaggtgcatgtt
gaattgcctggtggcagtttgcatatcagctggaaagggccgggtcacccgctgtatatg
accgggccggccacccatgtgtatgatggcttcattcatctatag
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