Yersinia enterocolitica (type O 5) YE53/03: YE5303_41371
Help
Entry
YE5303_41371 CDS
T03739
Symbol
mutU
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03420
Nucleotide excision repair
yee03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
YE5303_41371 (mutU)
03430 Mismatch repair
YE5303_41371 (mutU)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_41371 (mutU)
Enzymes [BR:
yee01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
YE5303_41371 (mutU)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YE5303_41371 (mutU)
MMR (mismatch excision repair)
Other MMR factors
YE5303_41371 (mutU)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
CCQ38605
LinkDB
All DBs
Position
237266..239428
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAQGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETADMPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRRMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggctgcg
ccacgctgcaacctgttggtactggccggtgcgggcagtggcaaaacacgggtgctggtt
catcgtattgcctggctgctgtcggtagaaaatgcctccccatattcgattatcgcggtg
acctttaccaataaagcggcggccgaaatgcgccaccgtattgagcatttgattggcacc
agtcagggcggcatgtggattggcactttccacgggttagcgcaccggttgctgcgtgct
caccatatggatgccaatctgccgcaagatttccaaatcctcgacagcgacgaccaactg
cggttattgaagcgcttggttaaggccttgaatttagatgaaaaacaatggcctccacgt
caggcaatgtggtacatcaacggcaaaaaagacgaaggtctacgtccgcagcatattgag
agctacggtaacccggttgaagccacttggttgcgtatttatcaggcctatcaggaagcc
tgtgaccgcgcgggcctggtggattttgccgagctattattgcgtgcacatgagttgtgg
ctgaataagccgcacattctgaaccactatcgcgagcgctttaccaacattctggtggat
gagttccaggataccaacaatattcaatatgcctggattcgcctgctggctggggatcgc
tccaatgtgatgattgtcggcgacgatgaccagtcaatttatggctggcgcggggcgcag
gtggagaatatccagcgcttcctgaaagattttcccggcgctgaaaccattcgattggag
cagaattatcgctcgaccagcaatattctgacggcggcaaacaccctgattgctaataat
gacggccgcatgggtaagaacttgtggactgatggggcgcaaggcgagcctatctcgctc
tattgtgcttttaacgagttggatgaagcccggtttgtggtgaatcgcattaaagcctgg
caagacaacggcggtgcgctgaatgattgtgccatcttgtatcgtagtaatgcccaatcg
cgtgttttggaagaggccttgttacaaacggcgatgccgtaccgtatttatggtggtcag
cgcttcttcgaacgtcaggaaatcaaagacgcactggcttatctgcgtctgatttccaat
cgtaacgatgatgctgcttttgagcgggtggtgaatacgccgactcgtgggattggtgat
cgcacattagatgttattcgccaaaccgcgcgtgaccgtcagttaaccttgtggcagtca
acccgtgccatgttgcaggaaaaagtgctggcaggccgtgcggcttctgcactgcaacgt
tttgtcgaactggtggattcactggcgcatgaaacagctgatatgccgctgcatgtccaa
actgatcgagtcattcgcgattctggcttgtggtcgatgtatgagcaggaaaagggcgaa
aaaggtcaggcgcgtgttgaaaaccttgaagaactggtcaatgcgacccgccaatacagc
tatcaggatgaagatcaggatctgatgccactacaggcatttctttctcatgcggcgctg
gaagccggtgaggggcaagcagatgcctatcaggatgcagtgcaattgatgactctccat
tcagcaaaagggctggagttcccgcaggtatttatcgtgggtatggaagagggcatgttc
ccaagtcagatgtcactggatgaaggtgggcgtctggaagaagaacggcggctggcctat
gttggggtcacgcgcgcgatgcagaaactgacactctgttatgccgagagccgccgcttg
tacggcaaagaagtgaatcatcggccatcacgttttatcggcgaattaccgcaagagtgc
gtcgaagaagtgcggctacgcgcgacggtctctcgcccggtaaaccaccgtagaatgggg
acgccgatgaatgaaaatgacagcggcttctcactgggtcagcgggtgcgacatcctaag
tttggtgaaggcactatcgtcaatttggaaggcagcggtgagcacagtcggttgcaagta
gccttccccggtgaagggattaagtggttggtggcggcttacgcacggctggaagccgtc
taa
DBGET
integrated database retrieval system
