Yersinia enterocolitica (type O 5) YE53/03: YE5303_42071
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Entry
YE5303_42071 CDS
T03739
Symbol
fadB
Name
(GenBank) fatty acid oxidation complex alpha subunit
KO
K01825
3-hydroxyacyl-CoA dehydrogenase / enoyl-CoA hydratase / 3-hydroxybutyryl-CoA epimerase / enoyl-CoA isomerase [EC:
1.1.1.35
4.2.1.17
5.1.2.3
5.3.3.8
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee00071
Fatty acid degradation
yee00280
Valine, leucine and isoleucine degradation
yee00310
Lysine degradation
yee00362
Benzoate degradation
yee00380
Tryptophan metabolism
yee00410
beta-Alanine metabolism
yee00640
Propanoate metabolism
yee00650
Butanoate metabolism
yee00907
Pinene, camphor and geraniol degradation
yee00930
Caprolactam degradation
yee01100
Metabolic pathways
yee01110
Biosynthesis of secondary metabolites
yee01120
Microbial metabolism in diverse environments
yee01200
Carbon metabolism
yee01212
Fatty acid metabolism
Module
yee_M00087
beta-Oxidation
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00640 Propanoate metabolism
YE5303_42071 (fadB)
00650 Butanoate metabolism
YE5303_42071 (fadB)
09103 Lipid metabolism
00071 Fatty acid degradation
YE5303_42071 (fadB)
09105 Amino acid metabolism
00280 Valine, leucine and isoleucine degradation
YE5303_42071 (fadB)
00310 Lysine degradation
YE5303_42071 (fadB)
00380 Tryptophan metabolism
YE5303_42071 (fadB)
09106 Metabolism of other amino acids
00410 beta-Alanine metabolism
YE5303_42071 (fadB)
09109 Metabolism of terpenoids and polyketides
00907 Pinene, camphor and geraniol degradation
YE5303_42071 (fadB)
09111 Xenobiotics biodegradation and metabolism
00362 Benzoate degradation
YE5303_42071 (fadB)
00930 Caprolactam degradation
YE5303_42071 (fadB)
Enzymes [BR:
yee01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.35 3-hydroxyacyl-CoA dehydrogenase
YE5303_42071 (fadB)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.17 enoyl-CoA hydratase
YE5303_42071 (fadB)
5. Isomerases
5.1 Racemases and epimerases
5.1.2 Acting on hydroxy acids and derivatives
5.1.2.3 3-hydroxybutyryl-CoA epimerase
YE5303_42071 (fadB)
5.3 Intramolecular oxidoreductases
5.3.3 Transposing C=C bonds
5.3.3.8 Delta3-Delta2-enoyl-CoA isomerase
YE5303_42071 (fadB)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
3HCDH_N
ECH_1
3HCDH
ECH_2
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
CCQ38675
LinkDB
All DBs
Position
complement(313152..315341)
Genome browser
AA seq
729 aa
AA seq
DB search
MLYQSETLKLHWLENGIAELVFDAPGSVNKLDTQTVANLGEALVVLEKQSELKGLLLRSA
KAAFIVGADITEFLSLFNEPPEKLHQWLVFANDIFNRLEDLPVPTIAAINGYALGGGCEC
ILATDFRVASPEARIGLPETKLGIMPGFGGSVRLPRLLGADSALEIIAAGKDIIAKDALK
VGLVDAVVAPEKLVDAALSMLRQAIDGKLDWQAARRPKLEPLKLNPTEAAMCFTIAKGMV
MQVAGKHYPAPLTAVKTIEAAAKFGRAEALKLETNSFVPLAGSNEARALVGIFLNDQYVK
GQAKKLSKGVSAPKQAAVLGAGIMGGGIAYQSALKGVPVIMKDINDKSLTLGMNEAAKLL
NKQLERGKIDGLKMANILATIQPTLDYAGIERAQIIVEAVVENPKVKAAVLAEVETLIGE
ETVLASNTSTIPIDQLAKSLKRPENFCGMHFFNPVHRMPLVEIIRGTKTSDKTIATIVAY
ATQMGKTPIVVNDCPGFFVNRVLFPYLAGFGMLVRDGADFRQIDKVMEKQFGWPMGPAYL
LDVVGIDTAHHAQTVMAVGFPERMNKDYRDAVDVMFDNQRFGQKNGQGFYRYTQDTKGKP
RKENDEQVDTLLAQVSQPLQKFSDDDIIARTMIPMINEVVRCLEEGIIASPAEGDMALVY
GLGFPPFHGGVFRYLDTIGSANYVEMAQRYTHLGALYQVPPGLRAKAEHNESYYPVAAAL
LDVSISQPA
NT seq
2190 nt
NT seq
+upstream
nt +downstream
nt
atgctctaccaaagcgaaacactaaagcttcactggctggaaaacggcattgccgagttg
gtgtttgatgcaccaggttcagttaataagctggatacccaaactgtagccaatctgggc
gaagccttggttgtgttagaaaaacaaagtgaactcaaagggttgctattacgctcagcc
aaagcagcctttattgtcggtgccgatatcaccgagtttctatccctgtttaatgagcca
ccagaaaagttgcatcaatggttggttttcgccaacgatattttcaatcgtttggaagac
ttaccggtgccaaccattgcagcaatcaatggatatgcactgggtggcgggtgtgaatgt
atcttagcgactgattttcgcgtggcctcgccagaagcacgtatcggcctaccggaaact
aaactcggtatcatgccgggcttcggcggttcagttcgcttacctcggctattaggcgca
gacagtgcgctggaaattattgcggctggcaaagacattattgccaaagatgccttaaag
gttgggctggttgacgccgtcgtcgcccccgaaaagttggtcgatgccgcgttaagcatg
ttgagacaagcgattgacggaaaactcgactggcaagctgcacgtcgcccgaaattagag
ccactgaagctcaatccgaccgaagctgcgatgtgctttaccattgccaaaggcatggtc
atgcaagtcgccggtaaacactatccggctcccttgactgccgtaaaaactattgaggcc
gcggcgaaatttggccgcgctgaagcattgaaactggaaaccaatagttttgttccctta
gctggttccaatgaagcgcgggcattagtcggtattttcttgaatgaccaatatgttaaa
ggtcaggctaaaaagctatccaaaggtgtcagcgcccccaaacaggccgcagtgctaggt
gccgggattatgggcggtgggattgcctatcagtcggcactgaaaggtgtgccggtcatc
atgaaagatattaatgacaaatccctcacattagggatgaatgaagcggccaagttgctg
aataagcagctggagcgcggcaagatagatggcctgaaaatggcaaatatcttagcaacc
atccagccaacattagattatgccggtattgaacgcgcccaaatcatcgtggaagcggtg
gtagaaaatccaaaagtcaaagcggcggttctggcagaggttgaaacgcttattggcgaa
gaaactgttctggcttctaacacttccacaattccgattgatcagctcgccaaatccctt
aaacgcccagaaaacttctgtggcatgcatttcttcaatccagtgcaccggatgccattg
gttgaaattattcgtggcaccaaaacctcagataaaactatcgccacgattgtggcatac
gccacacaaatgggtaaaaccccgattgtagtcaatgattgcccaggcttctttgttaac
cgtgttttattcccgtatctggcgggattcggcatgttagtccgagacggtgcggacttc
cgccaaattgataaagtgatggaaaagcaatttggctggccaatgggccctgcttatcta
ttagatgtggtgggcattgataccgcgcaccatgcgcagaccgtgatggccgttggtttc
cctgaacgcatgaataaagattatcgcgatgcggttgacgtgatgtttgataaccaacgg
tttggtcaaaagaatggccaaggcttctaccgctatacccaagatactaagggcaaaccg
cgtaaagagaatgatgaacaagtagatacgttactggcgcaagtcagccagccgcttcag
aaatttagcgatgacgatattatcgcccgtaccatgatcccgatgatcaatgaggtggtg
cgatgcctggaagaaggcattattgccagcccggctgaaggtgatatggcgttggtatat
ggccttggattccctccattccacggcggcgtcttccgctaccttgataccatcggcagt
gcaaattatgtcgaaatggctcaacgctacacccatcttggggcgttgtatcaagtcccg
ccgggattgagagccaaagccgaacataacgaaagctattatcctgtggcagcagcgctg
cttgatgtttctatcagtcaaccggcatga
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