Yersinia enterocolitica (type O 5) YE53/03: YE5303_42811
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Entry
YE5303_42811 CDS
T03739
Symbol
fpg
Name
(GenBank) formamidopyrimidine-DNA glycosylase
KO
K10563
formamidopyrimidine-DNA glycosylase [EC:
3.2.2.23
4.2.99.18
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
YE5303_42811 (fpg)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_42811 (fpg)
Enzymes [BR:
yee01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.23 DNA-formamidopyrimidine glycosylase
YE5303_42811 (fpg)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.99 Other carbon-oxygen lyases
4.2.99.18 DNA-(apurinic or apyrimidinic site) lyase
YE5303_42811 (fpg)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
YE5303_42811 (fpg)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Fapy_DNA_glyco
H2TH
zf-FPG_IleRS
NFACT_N
Zn_ribbon_6
Zn_ribbon_RPB9
Motif
Other DBs
NCBI-ProteinID:
CCQ38480
LinkDB
All DBs
Position
83008..83817
Genome browser
AA seq
269 aa
AA seq
DB search
MPELPEVETSRRGIEPYLVGQTILYAVVRNTRLRWPVSDEILALSDQPVLSVQRRAKYLL
IELKTGWIIVHLGMSGSLRILPEETEAEKHDHVDLVISNGKILRYTDPRRFGAWLWAKDL
ETSNVLAHLGPEPLSDEFTAEYLFEKSRNKRTVVKQWLMDNKVVVGVGNIYASESLFTAG
ILPERAAGSLTETEITQLVATIKAVLLHSIEQGGTTLRDFLQSDGKPGYFAQELQVYGRA
GELCRRCGNVIEIAKHGQRSTFFCRHCQH
NT seq
810 nt
NT seq
+upstream
nt +downstream
nt
atgcctgaattaccagaagttgaaaccagccgacgcgggatcgaaccttatcttgtcggc
caaactatcctttacgccgtagttagaaatacccgtttacgctggccggtttctgatgaa
atcctcgcactcagtgatcagccggtgttaagtgttcaacgtagagcgaaatatttgctg
atagagctgaagactggctggattatcgtgcatctggggatgtctggtagcctgcgcatt
ttgccagaagaaaccgaagcagaaaaacacgatcacgtcgatttggttatcagtaatggc
aaaatactgcgttataccgatccgcgccgctttggtgcctggttatgggcaaaagacctt
gaaaccagcaatgtattagcccatttagggccagaacccttgagtgatgaatttaccgct
gaatatctgtttgaaaagtctcgcaataaacgcactgtggtcaagcagtggctaatggat
aacaaagtagtggtcggggttggcaacatctatgccagtgaatcgctattcacggcgggt
attctgccggaacgtgcagccgggtcattaaccgaaaccgagataacgcagctggtggca
acaatcaaagccgtgttattgcactctattgagcagggtggcaccacattgcgcgatttt
ttacagtcagatggtaaaccgggttatttcgcgcaagaattacaggtatacgggcgggca
ggagagttatgtcgacgttgtggcaatgtgattgaaattgcaaaacatgggcagcgtagc
acctttttttgccgccactgccagcattaa
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