Yersinia enterocolitica (type O 5) YE53/03: YE5303_43301
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Entry
YE5303_43301 CDS
T03739
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
yee
Yersinia enterocolitica (type O:5) YE53/03
Pathway
yee03030
DNA replication
yee03410
Base excision repair
yee03420
Nucleotide excision repair
yee03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yee00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
YE5303_43301 (polA)
03410 Base excision repair
YE5303_43301 (polA)
03420 Nucleotide excision repair
YE5303_43301 (polA)
03440 Homologous recombination
YE5303_43301 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yee03032
]
YE5303_43301 (polA)
03400 DNA repair and recombination proteins [BR:
yee03400
]
YE5303_43301 (polA)
Enzymes [BR:
yee01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
YE5303_43301 (polA)
DNA replication proteins [BR:
yee03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
YE5303_43301 (polA)
DNA repair and recombination proteins [BR:
yee03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
YE5303_43301 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
YE5303_43301 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH
Obc1_cap
Prok-E2_E
DUF2529
HHH_5
Motif
Other DBs
NCBI-ProteinID:
CCQ38430
LinkDB
All DBs
Position
26829..29627
Genome browser
AA seq
932 aa
AA seq
DB search
MAQIAENPLILVDGSSYLYRAYHAFPPLTNSKGEPTGAMYGVLNMLRSLLLQYRPSHVAV
VFDAKGKTFRDELFAEYKSHRPPMPDDLRAQIEPLHQMVKAMGLPLLVVSGVEADDVIGT
LAQEAEKAGHAVLISTGDKDMAQLVTPNITLINTMNNAILGPQEVCEKYGVPPELIIDFL
ALMGDSSDNIPGVPGVGEKTAQALLQGLGGLDSLFSNLDKISTLTFRGAKTMSAKLEQNK
DVAYLSYKLATIKTDVELDITCDELNVSAPDDEQLHQLFSRYEFKRWLADVEAGKWLDGK
KDRPTAQASNKAFVAPESAPVAEVTAVLSQENYQTILDEKSLSDWIERLKKAEVFAFDTE
TDGLDTLSSNLIGLSFAVAPGEAAYLPLAHDYLDAPAQLDRDWVLAQLKPLLEDDKALKV
GQNLKFDQSMLARYGIDLRGIAFDTMLESYVLDSVAGRHDMDSLAERYLNHKTITFEEIA
GKGKNQLTFNQIALEQAGPYAAEDADVTLQLHLVLWPKLQQSEGLKRVFQEIEMPLLPIL
SRIERTGVLIDQNILAAHSKELTIRLDELEKQAHELAEEPFNLASPKQLQVILYEKQKLP
ILKKTPGGAASTNEEVLAELALDYPLPKVILEYRGLAKLKSTYTDKLPLMINPVSGRVHT
SYHQAVTATGRLSSRDPNLQNIPVRNEEGRRIRQAFIAPEGYRIMAADYSQIELRIMAHL
SQDKGLLAAFAAGKDIHRATAAEVFGLSLEKVTNEQRRSAKAINFGLIYGMSAFGLARQL
NIPRGEAQRYMDLYFERYPGVLEYMERTRKQAAEQGYVTTLDGRRLYLPDIHSRNATRRK
AAEREAINAPMQGTAADIIKRAMIAVDAWLQQQPEPLVRVIMQVHDELVFEVHESVLESA
EQKIRELMEQSMQLAVPLKVDVGVGYNWDQAH
NT seq
2799 nt
NT seq
+upstream
nt +downstream
nt
atggcccagattgcagaaaacccattaatcctcgtagacggttcctcttacctctatcgt
gcttaccatgcttttccgccgctaaccaacagcaagggcgagccaacgggcgcgatgtat
ggcgtgttgaacatgttgcgcagtctgttgctgcaataccgaccaagccatgtcgccgta
gtttttgatgccaaaggtaaaacatttcgtgatgagcttttcgcggaatataagtctcac
cgcccacccatgcccgatgatttgcgggctcaaattgagccgcttcaccaaatggttaag
gctatggggctacctttattggttgtttccggtgttgaggctgacgatgttattggtact
ttggcacaagaggctgaaaaagctggtcatgccgtattaattagtaccggtgataaagat
atggcgcaattagttacgccaaatatcactcttattaatacaatgaataacgctatttta
gggccacaggaagtgtgcgaaaaatatggcgttccccctgaactgattattgattttctc
gctctgatgggtgactcctccgataatattccgggagttcctggtgttggtgagaaaacg
gcacaggctttattgcaaggtctgggtggattggactcgctatttagtaatttggataag
atatccacgctgacattccgtggtgcaaaaacgatgtcggccaaattagagcagaataaa
gatgttgcctatctctcttataaattagccacgattaaaacggatgttgaactggatata
acttgtgatgagttgaatgtctcagcaccggatgatgagcaattacatcaattattcagt
cgttatgagtttaagcgctggctcgcagatgtagaggctggcaaatggctggatggtaaa
aaagataggccaacagcgcaggcaagcaataaagcttttgtagcaccagagtctgcacct
gtggctgaagtgaccgccgtgctctcacaagaaaattatcagactatcttggatgagaaa
tctttaagcgattggattgagcggcttaaaaaggcagaggtttttgcttttgatactgaa
actgacggccttgataccctcagcagtaatttaattggcctctcatttgcagtggcaccg
ggtgaagcagcttacctgccattagcgcatgattatttggatgcccctgctcagcttgat
agggattgggttctggcccagcttaaacccttgctggaagatgataaggcactgaaagtt
ggtcagaatcttaagtttgaccaaagcatgctggcacgttatggcattgatctgcgtggt
attgcttttgataccatgttggaatcttatgttttagacagtgttgccggcagacatgat
atggatagcctggcggagcgctatctcaaccataagaccattactttcgaagagatcgcc
ggtaaaggtaaaaaccaactcactttcaaccaaattgcgttagagcaagctgggccttat
gcggcagaagatgcagacgttaccctacagttgcacttggtgttgtggccgaagttacag
caaagtgaaggactcaaacgggtattccaagaaattgagatgccgttactgccaattttg
tcccgtatcgagcggacaggtgtattgattgaccagaatatattggcggcgcattccaaa
gaactgactattcgtcttgatgagctggaaaaacaagcgcacgaactggctgaagagcct
tttaatctcgcctcgccaaagcaattacaggttattttgtatgaaaaacaaaaactacct
atcttgaagaaaacccctggcggcgcggcttcaactaacgaagaggtgctggccgagttg
gcgctggattaccctctaccgaaggttattcttgagtatcggggcttagcgaagctgaaa
agtacctataccgataaactgccgttgatgattaacccggtttcagggcgagttcatacc
tcttatcatcaggctgtaactgccaccgggcgtttatcttcccgtgatcctaacttgcaa
aacattccggtgcgaaatgaagaggggcgtcgtatacgtcaggccttcattgcgccagaa
ggttaccgcatcatggcggctgactactcccagattgagctgcgtatcatggctcatttg
tcgcaggataaagggttattggcagcatttgctgctggcaaggatatccaccgcgcgact
gcggctgaagtctttggcttatcactggagaaagtcacaaacgagcaacgccgtagtgcg
aaagccatcaactttggtttgatttatggcatgagtgcatttggtttggcgcggcagctg
aatattcctcgtggggaagctcagcgttatatggatctctattttgagcgctatccaggt
gtgttggaatatatggagcgcacccgaaaacaagccgccgaacaaggttatgtcacgact
ctggatggccgtcgcctctatttacctgatattcactcacgtaatgctactcgccgcaaa
gctgcagaacgtgaagctatcaatgcgccgatgcaagggacagcagctgatattattaag
cgtgcaatgattgcagtggatgcctggttacagcaacaacctgagcctttggtgcgggtc
atcatgcaagtacacgatgaattagtatttgaagtgcatgagagtgtgctggaaagcgcc
gaacagaagatccgcgaactgatggaacaaagcatgcaactggccgtgccattaaaagtt
gatgtcggtgtgggttataactgggatcaagctcattag
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