Yersinia enterocolitica FORC_002: FORC2_0295
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Entry
FORC2_0295 CDS
T03890
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
FORC2_0295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
yef03021
]
FORC2_0295
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_0295
Enzymes [BR:
yef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
FORC2_0295
Transcription machinery [BR:
yef03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
FORC2_0295
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
FORC2_0295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
AKF36442
UniProt:
A0A0E1NDK9
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All DBs
Position
344102..345094
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AA seq
330 aa
AA seq
DB search
MQGSVTEFLKPRLVDIEQVSSTHAKVTLEPLERGFGHTLGNALRRILLSSMPGCAVTEVE
IDGVLHEYSTKEGVQEDILEILLNLKGLAVRVQGKDEVILTLNKSGIGPVTAADITHDGD
VEIVKPQHVICHLTDENASISMRIKVQRGRGYVPASARIHSEEDERPIGRLLVDACYSPV
ERIAYNVEAARVEQRTDLDKLVIEMETNGTIDPEEAIRRAATILAEQLEAFVDLRDVRQP
EVKEEKPEFDPILLRPVDDLELTVRSANCLKAEAIHYIGDLVQRTEVELLKTPNLGKKSL
TEIKDVLASRGLSLGMRLENWPPASIADNE
NT seq
993 nt
NT seq
+upstream
nt +downstream
nt
atgcagggttctgtgacagagtttctaaaaccgcgcctggtagatatcgagcaagtcagt
tcgacgcacgccaaggtgacccttgagccgttagagcgtggctttggccatactctcggc
aacgcactgcgccgtattctgctttcatctatgccgggttgcgcggtgaccgaggttgag
attgatggtgtactgcatgagtacagcaccaaagaaggcgtacaggaagatatcctggag
atcctgctcaacctgaaagggctggcggtgagagttcagggtaaagatgaagttattctt
accctgaataagtctggcattggccctgtgactgcagccgatatcacccatgatggtgat
gtcgaaatcgtcaagccgcagcacgttatctgccacctgaccgatgagaacgcatctatt
agtatgcgtatcaaagttcaacgtggtcggggttatgtgccggcttctgcccgaattcat
tcggaagaagatgagcgcccgattggtcgtttgttagtagacgcatgctatagccctgta
gagcgtattgcctacaatgttgaagcagcgcgtgtagaacagcgtaccgacctggacaag
ttggttatcgagatggaaaccaatggcacgatcgatcctgaagaggcgatccgccgtgcg
gcaactatcttggctgaacagcttgaagctttcgttgacctacgtgatgtacgtcagccg
gaagttaaagaagagaagccagagtttgatccgatcctgctgcgccctgttgacgatctg
gaattgactgtccgctctgctaactgcctcaaggcagaagctatccactacatcggtgat
ctggtacagcgtaccgaggttgagttgctgaaaacgcctaacctgggtaaaaaatctctt
actgagattaaagacgtgctcgcatcacgtggtctttctttaggcatgcgcctagaaaat
tggccaccggctagcattgctgataacgagtaa
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