KEGG   Yersinia enterocolitica FORC_002: FORC2_0396
Entry
FORC2_0396        CDS       T03890                                 
Name
(GenBank) regulatory protein CsrD
  KO
K18765  RNase E specificity factor CsrD
Organism
yef  Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:yef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:yef03019]
    FORC2_0396
Messenger RNA biogenesis [BR:yef03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Others
     FORC2_0396
SSDB
Motif
Pfam: EAL GAPES4 GGDEF GGDEF_2 DUF4501
Other DBs
NCBI-ProteinID: AKF36543
UniProt: A0A9P1V4F3
LinkDB
Position
459012..460931
AA seq 639 aa
MRFTTKLSVFMTLLVVLAMCLVLLGSTASFFYLCQKKMEHRLQSIVTAYDQSLLLQPADK
EREWLPIMMRTLGVLEVSVQNENSTLYQLKLPAIYAPWNSQNHHRSLVVPMLHQPGASMH
FTYIDPLNSYARSLYAAAILSLAVVIIAITLLLSFRWLREQTAGQEKLEWRAKRILNGER
EHAINSDGHEWPPCASRAIDHLLAELIEVREERNRVDTLIRTFAAQDAKTGFSNRQFFDN
QLTTQLEEPGAHGVVMMVQLPDFDSLIETDDHQKVQELMHSLINLLSTFVTRHPSALLAR
YHHSDIAILLPHKTLKDADVIAAQLVHALGALPAPQIIDRESLLHIGIVAYRNGDSAEQI
MDNAGQATKNAAMYGGNGWYVYDTRVAEKGRGSVKWRTLLEQTLANGGPRLYQKPVVTVD
GKIHHREIISRIYDGEQELRAAEFTPLVQLFGLGERYDRQKIDRIIPLLALWPDETLAFS
ISVDSLLQRPFQRWLRDTLLQCRKSDRERIIFELAEADVCQYISQIRPMMRLLLGVGCKV
MVSQAGLTVVSTSYIKSLRVEMIKLHPGLVRSINLRYENQLFVESLTGACAGTRAKVFAA
EVLTRQEWQTLKEKGVYGGQGNFFAPPTLLNPGKKKYSY
NT seq 1920 nt   +upstreamnt  +downstreamnt
atgcgatttacaaccaaactttctgtatttatgaccttgttggtcgtattggcgatgtgc
ttagtgctactgggtagcacggcaagtttcttttacttatgccagaaaaaaatggagcac
cgcctccagagcattgtgacagcttatgatcagtcattgctgttacaacctgctgataaa
gaacgcgaatggctaccaatcatgatgcgaacgctaggtgtgctggaagttagcgttcag
aatgaaaacagtacgttgtaccaactaaaactccctgccatttatgccccctggaacagt
caaaaccaccaccgtagcttggttgttcctatgttgcatcagccgggggcctcaatgcat
ttcacttatattgatcccttaaacagctatgcccgctccctttacgccgccgctatttta
tcgttggcggtggtgattattgcgataacgctgttgctgagtttccgttggttgcgtgaa
cagaccgcaggtcaggaaaaacttgagtggcgggctaagcggatcctgaatggcgaacgt
gagcacgccattaatagtgacggccacgaatggccgccttgtgccagccgtgctatagac
catctattggctgagctgatagaagtaagagaagagcgtaatcgcgttgatacattgatt
cgtacttttgccgcacaggatgccaaaaccggcttcagtaaccgccagttttttgataat
cagttaacgactcaattggaagagcctggtgctcatggtgtggtaatgatggtgcagtta
ccggactttgacagcttaattgaaacggatgatcaccagaaagtgcaagaactgatgcat
tcgctgattaacctactttcgacttttgttacccggcatccctctgcgttattggctcgt
tatcatcacagtgatatcgcgattttactcccccataaaacgctaaaagacgccgatgtt
atcgctgcgcaattggtgcatgcgcttggggcattgcctgcaccacaaattattgaccgt
gagtcactgctgcatattggcattgtggcgtaccgcaatggcgattccgctgagcagata
atggataatgctggacaagcgaccaaaaatgcggcgatgtatgggggtaacggctggtat
gtctatgatacccgcgtagcagaaaaaggccgtggtagtgtcaaatggcgcactttatta
gaacaaacgctggctaatggtggccctcggctttatcagaaaccggttgttactgttgac
ggtaaaattcaccaccgagaaataattagccgcatttatgatggcgaacaagaattgcgc
gccgctgaatttacccctctggtgcaattgttcggtttgggtgagcgctatgaccgccag
aaaattgatcggataattcctttattagctttatggccggatgaaactctggcattttct
atcagcgttgattcattattgcagcgtcctttccagcgctggctgcgggatacgctgttg
caatgtagaaaatcagatagagagcgaattatctttgaacttgcagaggcagatgtgtgt
caatatatcagccaaatccgcccgatgatgcgtttattgctgggtgtgggttgtaaggtc
atggtgtcgcaggccggattgacggtggtcagtacgtcatatattaagtctcttcgggtt
gaaatgataaaacttcatccgggattagttagaagtattaatttacgttatgaaaatcag
ttgtttgtcgagagcctaaccggtgcttgcgcgggaacgcgtgcaaaagtttttgcggca
gaagttcttactcgtcaagaatggcaaacgctgaaggagaaaggtgtttacggtggacag
ggcaatttttttgctccgccaacgcttttaaaccctggaaagaaaaaatattcgtattag

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