Yersinia enterocolitica FORC_002: FORC2_0840
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Entry
FORC2_0840 CDS
T03890
Name
(GenBank) exonuclease V subunit gamma
KO
K03583
exodeoxyribonuclease V gamma subunit [EC:
3.1.11.5
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FORC2_0840
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_0840
Enzymes [BR:
yef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FORC2_0840
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FORC2_0840
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_V_gamma
RecC_C
TTc_toxin_rep
Motif
Other DBs
NCBI-ProteinID:
AKF36987
LinkDB
All DBs
Position
940103..943474
Genome browser
AA seq
1123 aa
AA seq
DB search
MFTVYHSNQLDLLKALTTALIEREPLDNPFQQEVVLVQSPGMAQWLQMQLAQQFSIAANI
EFPLPATFIWEMFTRVLPGIPKESAFSKDAMTWKLMWLLPDLLENPVFSAMKRYLSDDSD
KRKIHQLAARVADLFDQYLVYRPEWFESWERGQLIDNLDDAQQWQALLWVELTRYTRQLE
QPEWHRANLYQRFIRTLLESDVCPTGLPKRVFICGISALPPIYLQALQALGKHIDIHLMF
TNPCRYFWGDIQDYAFLAKLQSRKRRHYRESVEVKLFRDPEQAEQLFNADGEQDLSNPLL
ASWGRLGRDHMYLLSQVDEIQEVHAFVDIEPDNLLHGVQHDMLELEDHAIIGTTPETLAH
SHQKRVLDLRDRSLSIHVCHSPQREVEVLQDNLLRLLEADPELTPRDIIVMVADIDSYTP
YIQATFGNATGERYLPFAISDRKASQAHPALQAFISLLDLPQSRFTSEQVLALLEVPVLA
NKFGITEDGLRRLRQWVDESGIRWGLDDDNVRELSLPATGQHTWHFGLTRMLLGYAMDSN
AGDWQGVLPYDESSGLAAELAGQLADMLMQLSQWRQQLSESRSLSEWLPLCRQLLDTFFE
PDNDTEAVLVLIEQQWQKVISYGIAAQYPDIVPLNLLRDELASRLDNERISQRFLAGPIN
FCTLMPMRSIPFKVVCLLGMNDGVYPRTLPPLGFDLMAKQVRRGDRSRRDDDRYLFLEAL
LSAQQQLYISYIGRSIQDNSKRYPSVLVSELIEYISQSYHLPGDEELSADDSAKRVIQHL
LCWHARMPFAAENFTQDSELQSYAAEWLPAAESRGAAHPEFNQPLPPEPLPEITLDELIR
FYRHPVRAFFQLRLGVNFVIEETELPDEEPFTLDNLNRYQFNTQLLNALIEESDINTVFT
RARAAGNLPYGSFGELYWENQQEEMLPLAEQIRTERKESHSIELNIESGDTTLTGWMHQI
QEDGLVRWRPAALTAVDGLLLWIEHLVYCAAGGEGESRMYGRKGTAWRYAPLDCDEARQY
LQQLISGYQQGMCEPLLLLSKSGWAWLSQCFDRESGQILWDEEIQTKARMKLLQVWQGDQ
RIAGEGEDNYIQRVFRLMDNQHLDMILNETERYLLPIARHNKA
NT seq
3372 nt
NT seq
+upstream
nt +downstream
nt
atgttcacggtttatcattctaatcaattggatttactcaaagcgctaacaactgcgctg
atagaacgagaaccgttggataacccttttcagcaagaagtggtactggtgcaaagccca
ggtatggcccaatggctacaaatgcaattggctcaacaatttagcattgcagctaatatt
gaatttccattgcctgcgacctttatctgggaaatgtttacccgcgtgttacccggcatc
ccaaaagaaagcgcatttagtaaagatgccatgacatggaaactcatgtggttattgcct
gacctattggagaatccggtattttctgcgatgaaacgctatttaagtgatgatagcgat
aaacgtaaaattcaccaacttgcggcacgagtcgctgacctttttgaccaatatctggtg
taccgcccagaatggtttgagagttgggaacgaggtcaacttattgataatttggatgat
gcccagcagtggcaagctttactgtgggttgaattaacgcgctatacccgccaattagaa
caaccggagtggcatcgcgccaatctctatcagcgttttattcgcacacttctcgaatcc
gatgtttgtccgacagggctgcccaaacgagtattcatctgtggcatatccgctttaccc
ccaatctatttacaggccttacaagcactgggtaaacacattgatatccatttgatgttt
actaatccgtgccgttatttctggggagacattcaggattatgcttttctggccaagctg
caaagccgaaaacgcagacattatcgtgagtcggtggaagtaaaactgttccgtgaccct
gagcaggcggagcaactatttaatgctgatggtgaacaagaccttagtaacccgttatta
gcttcatgggggcgacttggtcgtgaccacatgtatctgttatcccaggttgatgagatc
caagaggttcatgcatttgttgatatcgaacccgataacctattacatggtgttcaacac
gatatgctggagcttgaagaccacgccattattggtactacgccagagacattagcgcat
agccaccaaaagcgagtattagatctcagggatcgctccctaagcatacacgtctgccac
agccctcagcgcgaagttgaagtcttacaagataatctgctgcgattattggaggctgac
cctgagctgactccgcgtgacattattgtcatggtcgctgacattgatagctataccccc
tatattcaggccacatttgggaatgctacaggggagcgctatttgccatttgcgatttca
gaccgcaaggctagccaggcacatcctgcacttcaggcttttatctctctacttgatttg
ccccagagccgttttacttctgagcaggtattagccctgctggaagtgcctgttttagcc
aataaatttggtattaccgaagatggattgcgtcgtttgcggcaatgggttgacgagtca
ggtatccgctggggattagatgatgacaatgtgcgtgagttgtctctgcccgcaaccggt
cagcatacctggcattttggcctgactcgtatgctgctgggttatgctatggacagcaat
gccggtgactggcaaggggttttgccctatgacgaatccagtggtttagcggctgagctt
gccgggcaattagcggatatgttgatgcaattgagccagtggcgacagcaattgagcgaa
tctcgttcactcagtgaatggctaccattatgccgtcaattattagataccttctttgag
cccgataatgatactgaagcggtgctggttttgattgaacagcaatggcagaaggttatc
agctatggtattgctgcccaatatccggatatcgtgccactgaatctgttacgggatgaa
ctggcttcgcgcctggacaatgaacgaattagccagcgtttcctcgcggggccaatcaat
ttctgcacactgatgccgatgcgttcaatcccgtttaaagtggtgtgcttattggggatg
aatgatggtgtttacccacgaacactaccgccgttaggttttgatttgatggctaaacag
gttcggcgcggtgaccgtagccgccgtgatgatgaccgctatctgttcctcgaagcatta
ctctccgcccagcagcagctctatatcagttatatcgggcgctcgattcaagacaacagt
aagcgctatccttcagttctggttagcgagttgattgaatacatttcacaaagttatcac
ttgccaggtgatgaagaactcagtgcagatgacagtgccaaacgggtcatacaacattta
ctctgctggcatgcgcgtatgccgtttgcagcagagaattttacccaagatagtgaatta
caaagctatgccgctgaatggttacctgctgctgagtccagaggggcggcacacccagag
tttaatcagcctctgccaccagaacccttacctgaaatcactcttgatgaattaatccgc
ttctatcgccaccctgtgagggcttttttccaactccggttgggggtgaatttcgttatt
gaagaaacggagctacctgatgaagaaccttttactttggataacctcaaccgttatcag
tttaatactcaattattgaatgcattgatagaagaaagtgatatcaatactgtcttcacc
cgtgcccgtgcggcgggcaaccttccttatggttctttcggcgagctttactgggaaaat
cagcaagaagaaatgctgccattagctgaacaaattagaactgaacgcaaagagagtcac
agtattgagctaaacattgagtctggggataccaccctgactggatggatgcatcaaatt
caggaagatggcttagttcgttggcgaccagcggcacttacggcggttgatgggctttta
ttgtggattgaacatttggtgtattgcgccgcaggcggtgagggtgaaagccggatgtat
gggcgtaaaggcactgcatggcgttatgcgccactggattgcgatgaagcacggcaatat
ttacagcagttaatcagtggctatcagcaaggtatgtgcgaacctttactactactgagt
aaaagcggttgggcatggttgagtcagtgttttgatcgcgagtctggtcaaattttgtgg
gatgaagaaatacaaaccaaagcccgaatgaaacttttacaggtttggcaaggtgaccaa
cggattgccggagagggtgaggataactatatacaaagggtattccgcctgatggataac
caacatctcgacatgatattaaatgaaactgaacgttatttattaccaatagctcgccat
aataaggcgtga
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