Yersinia enterocolitica FORC_002: FORC2_0842
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Entry
FORC2_0842 CDS
T03890
Name
(GenBank) exonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
FORC2_0842
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_0842
Enzymes [BR:
yef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
FORC2_0842
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FORC2_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKF36989
LinkDB
All DBs
Position
946462..950091
Genome browser
AA seq
1209 aa
AA seq
DB search
MTSMTPQRLEPLTLPLYGERLIEASAGTGKTFTIGVLYLRLLLGLGGEAAFRRPLMVEEI
LVVTFTEAATEELRGRIRDNIHELRIACVRGVSDDPMHQALLAEIIDLSEAAAQLLAAER
QMDEAAIYTIHGFCQRMLANNAFESGILFEHTLVQDELPLRRQACADFWRRHCYPLPLTI
ARAVSQEWSGPEALLKDLSAYLQGETPKFRQAPGDDETIFSRHQQIVVQIDAVKAQWRAA
APELEALISGSGVDKRSYSARYLPSWLGKVGSWAEQETGDYQLPKELEKFRQSVLFEKTK
KGEAPQHDVFHAIDRIFEQPLTLRDLILARAISEIRISVQQEKRQRAELGFDDLLSKLDA
ALQQAGGELLAQSIRTRYPVAMIDEFQDTDPQQYRIFHTLYGGQEECGLLLIGDPKQAIY
AFRGADIFTYIRARSEVSAHYTLETNWRSSFPMVQSVNRLFSLVDVPFLFKQIPFINVVP
AQKNKQLSFEIKGKKQPAMSFWLQSGDGVGVSEYQQLMARQCAAQIRDWLTAGQKGLAQL
VTATSSRPVKASDITILVRSRAEAALVRDALSALAIPSVYLSNRDSVFDTAEAKDLLWLL
QAVLAPEQERALRSAMATGILGLDARMLDELNHDERAWDALVDEFDGYRQHWQRRGVLPM
LREIMAQRHLAENLLATQGGERRLTDLLHLGELLQEAASQLDSEHALIRWLAQQIAQPNH
QSDNQQLRLESDRHLVQVITIHKSKGLEYPLVWLPFVGNFRQQQDVLYHDRHSFEALLDL
NADEESQALAEEERLAEDLRLLYVALTRAVYHCSIGIAPLIKGGRKKQGESDMHLSALGY
LVQQGQAGDAQYLADKLAQLAALADGEISVSQAGQLDETPWLPQQDELPALAARQFSRQI
HDFWRVTSYSGLQQHGSSKSVASQALSVPLQELLPRLDTDAVGEQVLITEPQLTPHTFPR
GAAPGTFLHDLLEPLDFSQSIEQDWLTEQLQQQGFGEHWSSMLYQWLTDIVQTPLNETGV
TLAQLTPQSKQAELQFYLPIDTLLQARELDTLIKHYDPLSRQCPVLDFQQVRGMLKGFID
LVFCWQGKYYLLDYKSNWLGEDSSAYTHDAMAQAMAEHRYDLQYQLYTLALHRYLRHRLG
HYDYQRDFGGVIYLFLRGVDKQHPGNGIFSCRPERELIERMDCLFSGREVGPHISDNSGM
AITGEGTSI
NT seq
3630 nt
NT seq
+upstream
nt +downstream
nt
atgacatcaatgactccccagcggctggaaccgctaacgctccccttgtatggcgagagg
ctaattgaagcttccgctggtacaggtaagacttttaccattggggttctttatctcaga
ttgttgcttggcttaggcggggaagcagcgtttcgtcgccccttaatggtcgaggaaatc
ctggtggtgacctttaccgaagcagcaactgaggagttgagggggcgaattcgtgacaat
attcatgagttacgtatcgcctgcgtacggggagtcagtgatgatccaatgcatcaggct
ttgttagctgaaatcattgatttgagtgaggccgcagcgcaattactggcagctgagcgc
cagatggatgaagcggcaatttatactattcacggtttttgtcagcgaatgctggctaac
aatgcctttgaatcgggcatcttattcgaacataccttggtgcaagatgagctgccatta
cgcaggcaagcttgcgccgatttctggcggcgtcattgctatccgctcccgttgactatt
gccagagcggttagccaggagtggagtgggccagaggcattacttaaagatctttctgct
tacttacaaggtgaaacgccaaaatttcgacaagcgcctggtgatgatgaaacgatattc
agtcgacatcagcagatagtggtacaaattgatgcagttaaggcgcaatggcgcgcagct
gctccagagttagaggcgttgattagtggttctggtgttgataaacgcagctacagtgct
cgatatttacctagctggttaggaaaagtcggtagctgggctgagcaggaaaccggcgat
taccagttgcccaaagagttagagaaattccgccaatcagtactatttgaaaaaaccaaa
aagggtgaggctcctcagcacgatgtcttccatgctatagaccgtatattcgaacaacct
ctgacactaagagatctgattttagcccgagctatcagcgagatacgaatctctgtgcag
caagaaaaacgccagagggcagagctggggtttgatgatctgctcagtaaactggatgcg
gcattgcaacaagctggtggagaattgttggctcaatccattcgcactcgttatcccgta
gcaatgattgatgagtttcaagataccgacccgcaacaataccgaattttccacacactt
tatggtgggcaagaagagtgcggcctattactgattggtgaccctaaacaggctatttat
gcttttcgtggtgccgacatttttacttatattcgtgctcgctcagaagtcagtgcccac
tacacattagagactaactggcgctcatccttcccaatggtgcaatcagttaaccggctt
tttagtctggtcgatgttccttttttgtttaaacaaattccctttataaatgtggtgcct
gcgcaaaaaaataagcaattatcatttgaaataaaagggaaaaagcagccagctatgtct
ttctggttgcagtccggggacggtgttggggttagtgagtaccaacaattaatggcacgg
caatgtgccgctcaaatccgagactggcttactgctgggcaaaaaggtttggcacaatta
gtgacagccacaagttcaaggccggttaaggcgtcagatatcaccatattggtgcgtagt
cgggcagaggcggcattggtgcgcgatgccctgagtgcattggcaatcccatccgtgtat
ctctccaaccgtgatagcgtatttgatactgctgaggccaaagatctgctgtggctattg
caggctgttttggctcccgagcaggagcgggcattacgcagcgctatggcgaccggcatc
ttggggctggatgcgcgaatgttggatgagttgaatcacgatgagcgagcttgggatgct
ttggttgatgagttcgatggttatcgccaacattggcagcgccgtggggtgctcccgatg
ctgcgggagattatggctcagcgccatttagctgagaatttgctggcaactcagggcggt
gaacggcggctaacagatttgctgcatttgggcgaattattgcaagaagcagcatcacag
cttgatagtgagcacgcactcatccgttggctggcgcaacaaatagcacaaccgaatcat
cagtctgataaccaacaacttcgtttggaaagtgatcgacatttggtgcaagtcattact
atccataaatccaaaggattggaatacccgctggtttggctaccttttgtgggcaatttc
cgccagcagcaagacgtgctctatcatgatcgccacagctttgaagcattacttgatctg
aatgctgatgaagaaagccaggctttggcggaggaagaacgtctggctgaggacttacgg
ttattatacgtagcactcacccgtgcggtttatcattgcagcataggtattgccccgttg
attaaaggggggcgaaaaaaacagggtgaaagtgatatgcatctcagcgcgttaggctat
ctggtgcaacaaggtcaggcgggagatgcgcagtatcttgctgataaactggcacagtta
gcggcgctggcagatggagagatttctgtttcacaagccgggcaactggatgagacacct
tggctgccgcagcaggatgagttgccagcccttgctgctcgacagtttagtcgccaaata
cacgatttttggcgggtcaccagctattccggcctacaacagcatggctcgagtaaaagc
gtagcctcacaagcgctgagtgtaccattacaggagttattaccacggttggatactgac
gctgttggtgagcaggtattaataactgagcctcagttaacccctcataccttcccccga
ggtgcggcacccggtactttcttgcatgatttacttgaacctctggatttcagccagtcg
attgaacaagactggctgacagagcagttacagcaacaaggttttggtgagcattggtca
tctatgctgtatcagtggctaactgacattgtacaaacccctctaaatgaaaccggtgtg
acattggcgcaattgacaccacagagcaagcaagccgagttgcaattttatttgccgata
gacactttactgcaagcgcgtgagctagataccttaatcaagcactatgacccactctct
cgccagtgcccggtgttggattttcagcaagtcagaggaatgctgaaagggtttattgat
ctggttttctgctggcagggcaaatattacttattggattacaaatccaactggttgggt
gaggacagcagtgcctatacccacgatgcgatggcccaagccatggctgagcatcgttat
gacttgcaatatcagctttatactctagcattacaccgctatttgcgccatcgattgggc
cattatgactatcagcgcgactttggtggtgttatttatctcttcctgcgtggtgttgat
aaacaacatccggggaacggtatttttagctgccgccctgaacgagaactcattgagaga
atggactgtttattcagtggtcgtgaagtagggccgcatattagtgacaacagtggcatg
gcgataaccggtgagggcacatcaatatga
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