| Entry |
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| Name |
(GenBank) DNA polymerase III subunit alpha
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| KO |
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| Organism |
yef Yersinia enterocolitica FORC_002
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| Pathway |
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| Brite |
KEGG Orthology (KO) [BR:yef00001]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FORC2_0881
03430 Mismatch repair
FORC2_0881
03440 Homologous recombination
FORC2_0881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:yef03032]
FORC2_0881
03400 DNA repair and recombination proteins [BR:yef03400]
FORC2_0881
Enzymes [BR:yef01000]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FORC2_0881
DNA replication proteins [BR:yef03032]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FORC2_0881
DNA repair and recombination proteins [BR:yef03400]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FORC2_0881
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| SSDB |
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| Motif |
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| Other DBs |
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| LinkDB |
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| Position |
990313..993795
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| AA seq |
1160 aa
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHSA
GVKPIIGADFYVQSEILGDELAHLTVLARNNEGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGKFILRGNHAQVDQCLEFYQEHFPDSYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVEKSKQGL
EERLEFLFPDPEVRAQKRPAYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDITSIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKSQGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAMLEARKEGGYFKELFDLCARVDTKKLNRRILEKLIMSGAFDRLGPHRAALMS
SLGEALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYANVPPWQEQIVLDGERETLGLY
LTGHPITQYLKEIERYAGGLRLKDMHPTDRGKMTMAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD |
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| NT seq |
3483 nt +upstreamnt +downstreamnt
atggccgaacctcgttttgtccacctgcgtgttcacagcgattactccatgatcgatgga
ttagccaagattggacccttggtgaagagagctgctgcattaggcatgcccgctctggcc
attaccgattttaccaacctgtgcggcttggtaaaattctacggtagcgcgcatagtgct
ggagtcaaacccatcatcggcgcagacttctatgtgcaaagtgaaatcttaggtgatgaa
ttagctcaccttactgtgctggcacgcaacaatgaaggttaccaaaatcttactttactg
atatctgaagcttatcaacgcggctatggcgcagctggtcctattattgaccgtgactgg
ctgattaagcataaagaaggtctgattctgctgtccggtggtcggatgggggatgtgggt
aagtttattctgcggggtaatcatgctcaggttgatcagtgccttgagttttatcaagag
catttccctgacagttactatctggaattaatccgtactggtcgcccggatgaagaaaac
taccttcatgccgctgtggcattagcaaccgaacgtggcttgcccgtagtagcgaccaat
gatgtgcgttttatcgatgaatcagattttgatgcccacgagattcgcgtggctatccac
gacggctttactctggttgatcctaagcgacctaaaaactatagcccgcagcagtttatg
cgcgacgaagagcagatgtgtgagctgttcgcggatattcctgaggcgctgattaacagt
gttgaaatcgctaaacgttgtaatgtgacgatccggcttggggaatattttttaccccag
ttcccaacgggtgatatgagcacagaggacttcctggttgaaaagtctaaacaaggttta
gaagaacgactggagttcttgttccctgatcctgaagttcgggcacaaaaacgccccgca
tatgatgaacgtctggaaatcgaactaaaagttattaaccagatgggcttccccggctac
ttcttgatagtaatggaatttatccagtggtcaaaagataacggagtaccggtaggccct
ggacgtggttctggtgccggttctctggttgcttacgcgctgaagattaccgatcttgat
ccactggaatttgacctactgttcgaacgtttcttaaacccagaacgtgtatcaatgcct
gacttcgacgtcgacttctgcatggagaagcgcgatctggtgattgagcacgttgcggat
atgtatggccgggatgctgtttctcagataattacctttggtactatggcagccaaagcg
gtgatccgcgatgtgggccgtgtgctgggccatccttatggttttgtcgatcgtatctcc
aaactggtcccgcctgatccgggcatgacgttggagaaagctttcgcagcggaaccgcaa
ctgcctgaaatctatgaggcagatgaagaagttagagcgctgattgatatggcgcgaaaa
ttggaaggggtaacgcgtaacgccggtaagcatgccggtggggtggttatcgcaccaaca
aaaattaccgatttcgccccactatactgtgatgcggaagggaataacccggttacacag
ttcgataagaatgatgtggaatatgccggattggtgaagtttgacttccttggtttgcga
acgctcactatcattaactgggcgttggagatgatcaacgcccggcgcgctaaaaccgga
ttagagccgattgatattacgtctattccgctggatgataaaaaaagcttcgatatgctg
caacgttctgaaacgacagcagtattccagctagaatccagaggtatgaaggatcttatc
aagcgtctaaaacctgactgcttcgaagatatgatcgcactggtggcattattccgcccc
ggcccgttgcaatcagggatggttgataactttattgaccgtaaacacggccgagaagcg
atatcctatccagatattgaatggcagcatgaatctctaaaaccggtgcttgagccgacc
tacggcatcatcttgtaccaagaacaggttatgcagattgcgcaggttctgtctggttac
tcactcggcggcgcagatatgttgcggcgtgcgatgggtaagaaaaacccagcagagatg
gcgaaacagcgctctgtgtttgaagatggagccaaaagccagggcgttgacggcgagctg
gcaattaaaatctttgacctggtagagaaatttgccggctacgggtttaacaagtcacac
tccgcagcttatgcattggtttcctatcaaacgctatggctgaaagctcattacccggct
gaatttatggctgcggtaatgacggccgatatggataacactgataaagtagttggtctg
gttgatgaatgctggcggatggggctgaaaattctgcctccggatatcaacagcggccta
tatcatttccatgtaaatgatgagggcgaaattgtttatggtatcggtgcaatcaaaggt
gttggcgaggggcctatcgaggccatgttggaagcccgtaaagaagggggctatttcaaa
gagttatttgatttatgtgccagagttgacactaaaaaactcaatcgtcgaattttagaa
aagcttattatgtcaggtgcctttgaccgtttggggccacaccgggctgcattaatgagc
tcgctgggtgaggcattaaaggcagcagaccaacatgccaaggcagaagctattggtcag
gttgatatgtttggtgtattggcagatgcaccagagcaggttgagcaatcttatgctaat
gtgccgccgtggcaagagcagattgttttagacggtgagcgggaaactctggggttatac
ctgaccggccatccgatcacccagtatctgaaggaaatagaacgttatgccggcgggctg
cgtttgaaagatatgcatccgacggatcggggcaaaatgaccatggctgcggggctggtt
atcgcagccagagttatggtgacaaaacgcggaaatcgtattggcatttgtactttggat
gaccgttccgggcgtcttgaggtcatgctattcaccgatgcgttggaaaaatatcagcat
ttgttggaaaaagaccgtatcctgatagccaccggacaggtcagctttgatgactttagt
ggtggacttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatatcgctgaccgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtcgttggaaccccatcgagcggggacgatcccagtgcatctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgcttattgatagatttgcgaacgctggtaggtaatgagcaggtggaactggaatttgac
taa |
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