Yersinia enterocolitica FORC_002: FORC2_0881
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Entry
FORC2_0881 CDS
T03890
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03030
DNA replication
yef03430
Mismatch repair
yef03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
FORC2_0881
03430 Mismatch repair
FORC2_0881
03440 Homologous recombination
FORC2_0881
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yef03032
]
FORC2_0881
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_0881
Enzymes [BR:
yef01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
FORC2_0881
DNA replication proteins [BR:
yef03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
FORC2_0881
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
FORC2_0881
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
AKF37028
UniProt:
A0AAD2V226
LinkDB
All DBs
Position
990313..993795
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHSA
GVKPIIGADFYVQSEILGDELAHLTVLARNNEGYQNLTLLISEAYQRGYGAAGPIIDRDW
LIKHKEGLILLSGGRMGDVGKFILRGNHAQVDQCLEFYQEHFPDSYYLELIRTGRPDEEN
YLHAAVALATERGLPVVATNDVRFIDESDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLVEKSKQGL
EERLEFLFPDPEVRAQKRPAYDERLEIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDITSIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREA
ISYPDIEWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKSQGVDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTDKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAMLEARKEGGYFKELFDLCARVDTKKLNRRILEKLIMSGAFDRLGPHRAALMS
SLGEALKAADQHAKAEAIGQVDMFGVLADAPEQVEQSYANVPPWQEQIVLDGERETLGLY
LTGHPITQYLKEIERYAGGLRLKDMHPTDRGKMTMAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALEKYQHLLEKDRILIATGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRAGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgtccacctgcgtgttcacagcgattactccatgatcgatgga
ttagccaagattggacccttggtgaagagagctgctgcattaggcatgcccgctctggcc
attaccgattttaccaacctgtgcggcttggtaaaattctacggtagcgcgcatagtgct
ggagtcaaacccatcatcggcgcagacttctatgtgcaaagtgaaatcttaggtgatgaa
ttagctcaccttactgtgctggcacgcaacaatgaaggttaccaaaatcttactttactg
atatctgaagcttatcaacgcggctatggcgcagctggtcctattattgaccgtgactgg
ctgattaagcataaagaaggtctgattctgctgtccggtggtcggatgggggatgtgggt
aagtttattctgcggggtaatcatgctcaggttgatcagtgccttgagttttatcaagag
catttccctgacagttactatctggaattaatccgtactggtcgcccggatgaagaaaac
taccttcatgccgctgtggcattagcaaccgaacgtggcttgcccgtagtagcgaccaat
gatgtgcgttttatcgatgaatcagattttgatgcccacgagattcgcgtggctatccac
gacggctttactctggttgatcctaagcgacctaaaaactatagcccgcagcagtttatg
cgcgacgaagagcagatgtgtgagctgttcgcggatattcctgaggcgctgattaacagt
gttgaaatcgctaaacgttgtaatgtgacgatccggcttggggaatattttttaccccag
ttcccaacgggtgatatgagcacagaggacttcctggttgaaaagtctaaacaaggttta
gaagaacgactggagttcttgttccctgatcctgaagttcgggcacaaaaacgccccgca
tatgatgaacgtctggaaatcgaactaaaagttattaaccagatgggcttccccggctac
ttcttgatagtaatggaatttatccagtggtcaaaagataacggagtaccggtaggccct
ggacgtggttctggtgccggttctctggttgcttacgcgctgaagattaccgatcttgat
ccactggaatttgacctactgttcgaacgtttcttaaacccagaacgtgtatcaatgcct
gacttcgacgtcgacttctgcatggagaagcgcgatctggtgattgagcacgttgcggat
atgtatggccgggatgctgtttctcagataattacctttggtactatggcagccaaagcg
gtgatccgcgatgtgggccgtgtgctgggccatccttatggttttgtcgatcgtatctcc
aaactggtcccgcctgatccgggcatgacgttggagaaagctttcgcagcggaaccgcaa
ctgcctgaaatctatgaggcagatgaagaagttagagcgctgattgatatggcgcgaaaa
ttggaaggggtaacgcgtaacgccggtaagcatgccggtggggtggttatcgcaccaaca
aaaattaccgatttcgccccactatactgtgatgcggaagggaataacccggttacacag
ttcgataagaatgatgtggaatatgccggattggtgaagtttgacttccttggtttgcga
acgctcactatcattaactgggcgttggagatgatcaacgcccggcgcgctaaaaccgga
ttagagccgattgatattacgtctattccgctggatgataaaaaaagcttcgatatgctg
caacgttctgaaacgacagcagtattccagctagaatccagaggtatgaaggatcttatc
aagcgtctaaaacctgactgcttcgaagatatgatcgcactggtggcattattccgcccc
ggcccgttgcaatcagggatggttgataactttattgaccgtaaacacggccgagaagcg
atatcctatccagatattgaatggcagcatgaatctctaaaaccggtgcttgagccgacc
tacggcatcatcttgtaccaagaacaggttatgcagattgcgcaggttctgtctggttac
tcactcggcggcgcagatatgttgcggcgtgcgatgggtaagaaaaacccagcagagatg
gcgaaacagcgctctgtgtttgaagatggagccaaaagccagggcgttgacggcgagctg
gcaattaaaatctttgacctggtagagaaatttgccggctacgggtttaacaagtcacac
tccgcagcttatgcattggtttcctatcaaacgctatggctgaaagctcattacccggct
gaatttatggctgcggtaatgacggccgatatggataacactgataaagtagttggtctg
gttgatgaatgctggcggatggggctgaaaattctgcctccggatatcaacagcggccta
tatcatttccatgtaaatgatgagggcgaaattgtttatggtatcggtgcaatcaaaggt
gttggcgaggggcctatcgaggccatgttggaagcccgtaaagaagggggctatttcaaa
gagttatttgatttatgtgccagagttgacactaaaaaactcaatcgtcgaattttagaa
aagcttattatgtcaggtgcctttgaccgtttggggccacaccgggctgcattaatgagc
tcgctgggtgaggcattaaaggcagcagaccaacatgccaaggcagaagctattggtcag
gttgatatgtttggtgtattggcagatgcaccagagcaggttgagcaatcttatgctaat
gtgccgccgtggcaagagcagattgttttagacggtgagcgggaaactctggggttatac
ctgaccggccatccgatcacccagtatctgaaggaaatagaacgttatgccggcgggctg
cgtttgaaagatatgcatccgacggatcggggcaaaatgaccatggctgcggggctggtt
atcgcagccagagttatggtgacaaaacgcggaaatcgtattggcatttgtactttggat
gaccgttccgggcgtcttgaggtcatgctattcaccgatgcgttggaaaaatatcagcat
ttgttggaaaaagaccgtatcctgatagccaccggacaggtcagctttgatgactttagt
ggtggacttaaaatgaccgcccgtgagttaatggacatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatatcgctgaccgacaggcaaattgatgaccagcttttgaaccgt
ctccgtcagtcgttggaaccccatcgagcggggacgatcccagtgcatctttattaccaa
cgggaagatgctcgcgcccggctgcggtttggagccacatggcgcgtgacgcccaccgat
cgcttattgatagatttgcgaacgctggtaggtaatgagcaggtggaactggaatttgac
taa
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