Yersinia enterocolitica FORC_002: FORC2_1023
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Entry
FORC2_1023 CDS
T03890
Name
(GenBank) ATP-dependent RNA helicase SrmB
KO
K05590
ATP-dependent RNA helicase SrmB [EC:
5.6.2.7
]
Organism
yef
Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
yef03009
]
FORC2_1023
Enzymes [BR:
yef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FORC2_1023
Ribosome biogenesis [BR:
yef03009
]
Prokaryotic type
rRNA helicases
FORC2_1023
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GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
P-loop_SecA
AAA_22
CMS1
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AKF37170
UniProt:
A0A9P1M2Y0
LinkDB
All DBs
Position
complement(1130832..1132157)
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AA seq
441 aa
AA seq
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MTVTNFSELDLDERLIDALRDKGYERPTAIQAAAIPPAMDGRDVLGSAPTGTGKTAAFLL
PALQHLLDFPRKKSGPPRILILTPTRELAMQVADQARELAKHTQLDIATITGGVAYMNHA
EVFSENQDIVVATTGRLLQYIKEENFDCRAVETLILDEADRMLDMGFAQDIETISAETRW
RKQTLLFSATLEGEAIREFAERILTEPVELEADPSRRERKKIQQWYYRADNIEHKTALLV
HLLKQPEVQKSIIFVRTREKVHQLVSWLREAGINAWFLEGEMVQAKRTEAVIRLSDGRVN
VLVATDVASRGLDIDDISHVFNFDLPLTADVYLHRIGRTGRAGRKGVAISLVEAHDHLLL
GRIGRYLKEPLKPRVIDELRPTSKAPSEKSTGKPSKKVLAKRKELKEAGKEKTKVKVRHR
DAKNVGKRRKPKDKPDTKSAS
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgactgtaaccaatttttccgaactcgatctcgatgaacgcctgattgacgcattgcgc
gacaaaggctatgagcgcccgactgccattcaagctgcggctattccgccagctatggat
gggcgcgatgtattgggttcggcaccaacaggtaccggcaaaactgccgcctttttgctg
cccgccttgcagcatttgctggatttcccacgcaaaaaatctggcccaccacggattttg
atcctgacgccaactcgtgagttagccatgcaagtggcagatcaagcccgtgagcttgcc
aagcatacccaactggatatcgcgaccatcactggtggtgtcgcttatatgaaccacgcg
gaagtctttagtgagaatcaggatattgtagtggcgacaaccggccgcttactgcaatac
atcaaagaagaaaactttgactgtcgggcggtagaaaccctgattctggacgaagctgac
cgtatgcttgatatgggcttcgcacaggatattgaaactatctcggcagaaacccgctgg
cgcaaacagaccttacttttctcggccacgctagaaggtgaagctatccgtgagtttgcg
gagcgcatcctgactgagccggtagagttggaagctgacccatcacgccgtgaacgtaaa
aaaattcagcaatggtattaccgcgcagacaatattgagcacaaaactgccttgctggtg
catttactgaagcaaccagaagtacagaaatccattatttttgtgcgtacccgtgaaaag
gtacatcaactggtcagttggttacgcgaagctggaattaatgcctggttccttgagggt
gaaatggttcaggccaaacgtaccgaagccgtgattcgtttaagcgatggtcgggttaac
gttctggttgcaacggatgtggcttcgcgcggtctggatatcgacgatatcagccacgtg
ttcaactttgatttaccgctgactgctgacgtctatcttcaccgtatcggtcgtactggc
cgcgcagggcgtaaaggggttgctatttctctggttgaagcgcatgaccatttattgctg
ggcagaataggtcgttatctgaaagagccattaaagccacgagtgattgatgagctgcga
ccaaccagtaaagcgccgagcgagaaaagcacaggtaaaccgtctaaaaaagttttagcg
aagcgtaaagagctaaaagaagccggtaaagagaaaacgaaggttaaggttcgccatcgt
gatgctaagaatgtgggtaagcgccgtaagccaaaggacaagcccgataccaagagtgcg
agttaa
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