Yersinia enterocolitica FORC_002: FORC2_1585
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Entry
FORC2_1585 CDS
T03890
Name
(GenBank) peptidase
KO
K21470
L,D-transpeptidase YcbB
Organism
yef
Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
yef01002
]
FORC2_1585
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
yef01011
]
FORC2_1585
Peptidases and inhibitors [BR:
yef01002
]
Cysteine peptidases
Family C82
FORC2_1585
Peptidoglycan biosynthesis and degradation proteins [BR:
yef01011
]
Peptidoglycan biosynthesis and degradation
Transpeptidase
FORC2_1585
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
YkuD
Scaffold
PG_binding_1
PG_binding_3
Motif
Other DBs
NCBI-ProteinID:
AKF37732
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Position
1809102..1810970
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AA seq
622 aa
AA seq
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MSVEKRNPQRAFALYCALICSLMPTFTASATAPIMPVDSSSARSPASQSMSVAQSRSQLL
AVLPKNVTPFYSSELAVLYAANYMQPMWQDRAAVQHFQQQLAELALSGIQPQFMQWVKWL
SDPAITGLARDVILSDAMLGYLHFISGVGANGSVWLYSNVPYKMAMPPATILNRWQQAVH
EGTTAPYLASLAPQHPQYEKMHQALKEMLADRRPWPQMANGPSLRPGQLSDDIPALREIL
DRTGMLHPVVSAPVQTPEVIPVDNPAVAVVNDDLSVDEEKSRAQAHSLVVSPSAAPVADT
PVTSGVVAPSSAPVTATVTDNVYTPELVEAVKRFQRWHGLSDDGIIGARTREWLNVSPQT
RATLLALNIQRLRILPGRVDNGIMVNIPNYSLNYYKNGTQVLSSRVIVGRPSRKTPLMSS
ALNNVVVNPPWNVPTSLVRQDIVPKARYDSSYFQRHGYTVLSGWSNDAEVVDPSMIDWSM
ISPNNFPYRLRQAPGASNSLGRFKFNMPSSDAIYLHDTPNHGLFQKDIRALSSGCVRVNK
ASDLANMLLQDAGWNDARVSSTLKQGDTTYVNIRQRVPVQLYYLTAWVADDGKPQFRTDI
YNYDMTVRSGSQISHQAELLLQ
NT seq
1869 nt
NT seq
+upstream
nt +downstream
nt
atgtcggtagagaaaagaaatccgcaacgcgcattcgcgttatattgcgctttaatttgt
agcctgatgcctacatttaccgcatcggccacagcacctatcatgcctgtagattcatcg
tcggcgcgctcacctgcatcgcaaagcatgtcggtggcacaaagccgttcccaattattg
gcggtattaccgaaaaacgttacgccgttctattcttctgaattggctgtgctttatgct
gcaaactatatgcaacctatgtggcaagatcgagccgctgttcagcatttccagcaacaa
ttagcggaattggcactctccggtatccaaccacaatttatgcaatgggtgaaatggctc
agtgatccggccattaccggtctggcgcgcgatgttattttgtccgacgcgatgctgggc
tatttgcactttatctcaggtgtcggtgcgaatggtagtgtctggttgtacagcaatgtg
ccgtacaagatggcgatgccacctgcaacgattttaaatcgttggcagcaggcggtgcat
gagggtactacggctccatatctggcgtccctggcacctcagcatcctcaatatgaaaaa
atgcatcaggcactgaaagagatgctagccgaccgccgcccgtggccacaaatggccaat
ggcccgagtttacgcccaggtcagctaagcgacgatatacctgctttacgggagattctc
gacagaaccggcatgttgcatccggttgtgtcagcaccggtacaaactccggaagtcatt
cctgttgataatccggcggtggcggtggtgaatgatgacctctctgtcgatgaagagaaa
agccgtgcccaggcccacagcctggtggttagtccatcagcagcacctgttgcagatacg
ccggtgaccagtggcgtggttgctccatcttctgcgcctgtgacggctacagtgactgac
aatgtctacacgccagagctagtggaggcagtcaaacgttttcaacgctggcatggtctg
agtgatgatggcattatcggtgcccggacgcgtgagtggttgaatgtttctccgcagaca
agggcgacattgttagcattgaatattcagcgtttgcgtattttgccggggcgggtggat
aacggcatcatggttaacattccaaactattcgctgaattattataaaaatggcacacag
gtgctttcatcccgtgtgattgtgggtcgcccaagccgtaaaacaccattaatgagtagt
gcgctgaataatgtagtggtaaacccgccgtggaacgtgccgacctctctggtgcgtcag
gatatcgtgccgaaagcacgttacgattccagctatttccagcgtcatggctataccgtc
ttgtccggttggagtaatgatgccgaagtcgtcgatccttcgatgattgactggagcatg
atttcaccgaacaacttcccgtaccgcttgcgccaggcaccaggtgccagcaactccttg
gggcggttcaaattcaatatgccaagctcagatgccatctatctgcatgacacgccgaac
catggcttgttccagaaagatatccgcgcgctgagctctggttgtgttcgggtgaataaa
gcctctgatttagccaatatgctgttgcaggatgctggctggaatgatgctcgggtatcc
tcgaccttgaaacaaggcgatactacttatgtcaacatccgccaacgcgtgccggtacaa
ctctattatctgacggcgtgggtggctgatgacggtaaaccgcagtttagaacagatatt
tacaattatgatatgacggtgagatcaggttcacaaatctcccatcaagccgaacttttg
ctgcaataa
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