Yersinia enterocolitica FORC_002: FORC2_2005
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Entry
FORC2_2005 CDS
T03890
Name
(GenBank) exoribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
yef
Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yef03016
]
FORC2_2005
Enzymes [BR:
yef01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
FORC2_2005
Transfer RNA biogenesis [BR:
yef03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
FORC2_2005
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Gene cluster
GFIT
Motif
Pfam:
RNB
OB_RNB
S1
CSD2
S1CSD-TOTE-2
Motif
Other DBs
NCBI-ProteinID:
AKF38152
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All DBs
Position
complement(2262611..2264545)
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AA seq
644 aa
AA seq
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MFQDNPLLAQLKQQLHTQTPRVEGVVKGTEKGFGFLEVDGQKSYFIPPPQMKKVMHGDRI
IATLHTDKDREIAEPETLVEPFLSRFVGRVQRKDDRLSIVPDHPLLRDAIQCRPVRELTH
DFQTGDWAVAEMRRHPLKGDRAFNADLTAFITDGEDHFVPWWVTLARHNLEREAPVMIES
ALHDANLQREDLTALNFVTIDSASTEDMDDALHVQDNGDGSLLLTIAIADPTAYVDENSE
LDLIARKRAFTNYLPGFNIPMLPRDLSDNLCSLRPNERRPVLVCRVTVAADGALGDDIHF
SAAWVESKAKLVYDEVSDWLEGSGDWQPQNADIAEQITLLKRVCEARSHWRETHALVFKD
RPDYRFLLGEKGEVLDIIVEHRRIANRIVEECMIAANVCAAIALRDNLGFGIYNVHTGFD
PALVEQAANVLQANGVEADPQALLTLPGFCELRRHLDALPTQFLDSRIRRFQTFAEISTV
PGPHFGLGLEAYATWTSPIRKYGDMVNHRLLKAIITGQQAEKPQDEITVQLAERRRLNRM
AERDVGDWLYARYLQPMAGTDTRFPAEIIDVTRGGLRVRLLDNGAVAFIPAPFIHAVRDE
MVCSQETGTVQIKGETVYSQSDKIEVRIAEVRMETRNVVARPVV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgtttcaagataacccgctgctggcgcagctaaaacagcaacttcacactcagactcca
cgcgtcgaaggcgtggttaaaggtactgagaaaggctttggctttcttgaggtagacggg
cagaaaagttactttattccgccaccacagatgaaaaaagtcatgcatggcgatcgtatt
attgccactcttcacaccgataaagatcgtgaaattgctgagccggaaaccctggttgag
ccatttttgtcccgctttgttggccgtgtgcaacgaaaagatgaccgcctgtctatcgtt
cctgaccatcctctgctgcgtgatgccattcaatgtcgtccagtgcgtgaactgactcac
gatttccagaccggtgattgggcggtggccgagatgcgccgccatccattaaaaggtgac
cgtgcctttaatgccgacctgactgcttttattacggatggtgaagatcactttgtccct
tggtgggtcaccctggcgcgccataatttggagcgcgaagcgcccgtcatgattgaatca
gcgttgcatgatgccaacctgcaacgggaagatttgactgcgcttaattttgtcactatc
gacagcgccagcacggaagatatggatgacgcgttgcatgtgcaagacaacggtgacggc
tccctgttgttgaccattgctattgctgaccctactgcttatgtcgatgaaaacagtgag
ttggacttaattgcccgtaaacgtgcatttaccaactatctgccgggctttaatatcccg
atgctgccacgtgatttatccgataacctttgctcactgcggccgaatgaacgccgcccg
gtattggtgtgccgcgtcactgtcgctgccgatggcgcgctcggtgatgatattcacttc
tctgccgcctgggttgagtcgaaagccaaactggtttatgacgaagtttctgattggtta
gaaggcagtggtgactggcagccacaaaatgctgatatcgctgaacaaatcaccttatta
aaacgtgtttgcgaagcgcgcagccattggcgtgaaacacatgcattggtgtttaaagac
cggcctgactatcgcttcttgttgggcgaaaaaggcgaagtgctggatatcattgttgaa
caccgtcgtattgctaaccgtattgttgaagagtgcatgattgccgccaacgtctgtgcc
gctattgcgctgcgtgataatcttggttttggtatctataacgtgcataccggttttgat
cccgcgctggttgagcaagccgctaatgtgttgcaggccaatggggtggaagccgatccg
caagcgctgctgaccttacctggtttctgtgaattgcgccgtcatcttgatgccttaccg
acccagttccttgatagtcgcatccgccgtttccagacattcgctgaaatcagcacggtt
cccggcccacacttcggtttagggcttgaagcttacgccacctggacctcgccaattcgt
aaatacggcgatatggtcaaccatcgtctgctgaaagccattattaccggacagcaagcg
gaaaaaccacaggacgaaatcacggttcaattggccgaacgccgccgtttgaatcgcatg
gcggaacgtgatgtcggtgattggttgtatgcccgttacctacaaccgatggcaggcacc
gatacgcgcttccctgcggaaatcattgatgtcactcgcggcggcctacgggtgcgctta
ctggataacggcgcagtcgcctttattcccgcgccctttattcatgcggtgcgtgatgaa
atggtctgcagccaggaaaccggcactgtacaaatcaaaggtgaaacggtttacagccag
agcgacaaaattgaagtacgcattgccgaagtgcggatggaaacgcgtaacgtggtggca
cgcccagtggtttga
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