Yersinia enterocolitica FORC_002: FORC2_2020
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Entry
FORC2_2020 CDS
T03890
Name
(GenBank) peptidase C39
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
FORC2_2020
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
yef02000
]
FORC2_2020
02044 Secretion system [BR:
yef02044
]
FORC2_2020
Transporters [BR:
yef02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
FORC2_2020
Secretion system [BR:
yef02044
]
Type I secretion system
RTX toxin transporter
FORC2_2020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_22
AAA_16
ABC_ATPase
AAA_18
Rad17
AAA_21
PRK
AAA_14
AAA_29
AAA_28
RsgA_GTPase
AAA_25
RNA_helicase
Mg_chelatase
AAA_30
CoaE
AAA_5
NB-ARC
KAP_NTPase
Motif
Other DBs
NCBI-ProteinID:
AKF38167
LinkDB
All DBs
Position
2284395..2286527
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AA seq
710 aa
AA seq
DB search
MMNSTTTQVNQPLAALARAAACFDLAVESSHLAHKVGLAPQDIDNITLCRCANWIGLRAR
AVNYPISRLDNLTLPLLFSCDTQWYVLLALNEQEASIYCYADSQQQHLQKQISRQELASL
WCGEAILLAKAELHEQKKIPFGFSWFIPVITKYRLQLRNIILVSLLLQGILLVTPMLFET
VIDKVLVSRGMGSLMVLGIAMIALAIVEPCYTFLRGWLFSHLSSRVGAELNTGLYRHLMG
LPLGYFASQQTGQTIAKVREMEQIRSFLTGSALTMLLDLVFVSTFIAVMFCYSQPLTWIV
LFSLVCYLLFWWAAGGMLRKRVERQYETRAQNTAFLTEAISGLETIKTSATENQFNRSWR
RSLANYVRASFACARAANIAEQGISLINKVTSAILLWVGVTLVLDGELSPGQFIAFTLFS
GYVTQPILRLAQIWQDFQHTQVALKRIGTILDYPTEPGSAGLLSSSNSPGGLAFKQVRFR
YRPDTAEVIQNLNLEIAGGEFIGITGPSGCGKSTLTKLLQRLYTPQHGQILVDGQDLAIT
DATTLRCQMSVVLQESVLFSGSIRDNICQCRPNADDAHVEHIARLAGAHDFIAALAQGYQ
TPVGERGSLLSGGQRQRVALARALMADPKILILDEATSALDYESEASIMRQLPEITRNRT
VICIAHRLNTLRQCHRILVLKEGQVLEQGNHQELLDKSGTYARLWRLQTE
NT seq
2133 nt
NT seq
+upstream
nt +downstream
nt
atgatgaattcaaccacgactcaggttaatcaaccgttggcggcgctggcccgtgctgcg
gcctgttttgatttggctgttgaatcttcacacttggcacataaggtcggattagcgccg
caagatatcgataatattactctatgtcgctgtgctaattggattggcttgcgggccagg
gcggtgaactatcccatttcacgtctggacaatctgacgctgccactgctattcagttgt
gatactcagtggtacgtgttattggcccttaatgaacaagaagcgagcatttattgttat
gccgatagtcagcaacaacatctacaaaaacagataagccggcaggaactcgccagcttg
tggtgtggcgaggccatattattggcaaaagctgagctgcatgagcaaaagaaaataccc
tttggctttagctggtttattccggttatcaccaaataccgcctccagttgcgtaatatc
attttggtttcattgctattgcaggggattttgctggtgacgccgatgctatttgaaacg
gttatcgacaaagtcctggtgagtcgcgggatgggcagcctaatggtgctgggaattgcc
atgattgcgctggcgattgtggaaccctgttatacctttttacgcgggtggttgttttca
catttatccagccgagtgggggccgagcttaataccgggctttatcgccatttaatgggg
ttgccactgggttacttcgcttcacaacaaaccggacaaaccatcgctaaagtgcgagaa
atggagcaaattcgcagctttctaaccggttctgctttaaccatgctactggatttggtt
tttgtcagcacttttatcgcagtgatgttttgctatagccaaccactgacatggatagtc
ttgttctctctggtttgttatctgctgttttggtgggctgcgggcggaatgctacgtaag
cgggtggagcgccaatatgaaacccgtgcacagaatacggcatttctcaccgaagcgatt
agtggattggaaactatcaagacatctgccaccgaaaaccagtttaatcggagttggcgg
cgttcattggcaaactatgtccgtgcctcatttgcttgtgccagagctgccaatattgct
gagcaaggtatcagtttaattaataaagtgacttcggcaattttattgtgggttggtgtc
acgttggtattggacggagagcttagccccggccagtttatcgcgtttacgttattttcg
ggttatgtcactcagcctatcttgcgtttggcgcaaatctggcaagattttcagcatacg
caggtggcgctaaaacgcattggtaccattctggattatcccactgaaccgggcagcgct
gggttgttatcgagttcgaatagcccaggggggctggcttttaaacaggtacgtttccgt
tatcgacccgataccgccgaagtgatacaaaaccttaatttagagattgctggtggtgag
tttattggtattaccggcccatctggctgcggaaagtccacattaaccaagctactccaa
cgattatatacaccacaacacgggcaaattttggtcgacgggcaggatttggctattacg
gatgccaccacattgcgctgtcagatgagtgtggtgttgcaggagagcgtactattttct
ggctcgatacgtgacaacatatgccagtgtcggccaaacgctgatgatgctcatgttgag
catattgctcgattagctggcgcacatgactttattgctgcactagcacagggttatcaa
acgcccgttggcgaacgcggcagtttgttatcgggagggcagcggcagcgagttgcattg
gcgagagcactgatggcggatcccaaaatactgattcttgatgaagcaaccagtgcgctg
gattatgagtctgaggcgtcgattatgcgccagttgccggaaatcacgcgtaatcgcaca
gtaatctgcattgcacatcgtttaaacaccttgcgtcaatgtcatcgtattttggtgtta
aaagaggggcaagtattagagcagggtaaccatcaagagttgttggataaatctggcact
tatgcacgcctgtggcgattacagacagaataa
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