Yersinia enterocolitica FORC_002: FORC2_2882
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Entry
FORC2_2882 CDS
T03890
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FORC2_2882
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_2882
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FORC2_2882
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
FORC2_2882
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrB_inter
UvrB_3rd
Helicase_C
UvrB
ResIII
UVR
DEAD
UB2H
AAA_30
DUF87
AAA_22
SBDS_domain_II
Motif
Other DBs
NCBI-ProteinID:
AKF39029
LinkDB
All DBs
Position
complement(3221288..3223300)
Genome browser
AA seq
670 aa
AA seq
DB search
MSKSFKLHSEFKPAGDQPEAIRKLEEGLENGLAHQTLLGVTGSGKTFTVANVIADLNRPT
MVLAPNKTLAAQLYGEMKEFFPENAVEYFVSYYDYYQPEAYVPSSDTFIEKDASVNEHIE
QMRLSATKALLERRDVVVVASVSAIYGLGDPDLYLKMMLHLTKGMIIDQRSILRRLSELQ
YSRNDQVFQRGTFRVRGEVIDIFPAESDEWALRVELFDEEVERLSIFDPLTGQLQHEVPR
FTVYPKTHYVTPRERILQAMEDIKVELAERRKVLLANNKLIEEQRITQRTQFDLEMMNEL
GYCSGIENYSRYLSGRGPGEPPPTLFDYLPSDGLLIVDESHVTIPQIGGMYKGDRSRKET
LVEYGFRLPSALDNRPMRFEEFEALAPQTIYVSATPGKYELEKSGGDVIDQVVRPTGLLD
PLIEVRPVATQVDDLLSEIRIRAAINERVLVTTLTKRMAEDLTEYLVEHGARVRYLHSDI
DTVERVEIIRDLRLGEFDVLVGINLLREGLDMPEVSLVAILDADKEGFLRSERSLIQTIG
RAARNLNGKAILYGDRITASMEKAIGETERRRAKQQAYNEERGIIPQGLNKKIGDILQLG
QPSTRGKGKGRGGKMADTNNYQSLAPKALDQKIRELEAKMYTHAQNLEFEQAAELRDQVH
QLRQQFIAIS
NT seq
2013 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaatcattcaaactacattctgagtttaagccagcaggtgatcagcctgaggcc
atccggaaactggaggaggggctggaaaatggtctggctcatcagacgctgttgggggta
accggctcgggcaaaacctttacagtggccaatgttattgctgacctgaatcggcccacc
atggtgttagcccccaacaaaaccctggccgcacaactttatggtgagatgaaagagttc
tttcccgagaatgcggtggaatatttcgtctcctattatgactattatcaacctgaagct
tatgtaccaagttcagacacctttatcgagaaagacgcctcggtaaacgaacatatagaa
caaatgcggttatcagccaccaaggcattgctggagcggcgcgacgtggtggtggtggcc
tcggtctctgccatttatggtctgggtgatcctgatttatacctgaaaatgatgctgcat
ttgaccaaggggatgataatcgaccaacgctccattttgcggcgcttgtcagaattgcaa
tacagtcgcaacgaccaggtgtttcagcgcggcactttccgggtacgtggcgaggttatt
gacatcttcccggcggagtctgatgaatgggcactgcgggtagagttgtttgatgaggaa
gtggagcggctatcgatatttgatccgctgaccggccagctacaacatgaagttccacgt
tttactgtttaccctaaaacgcactacgttaccccgagagagcgtattttacaggcgatg
gaagacatcaaggttgagctggcagagcggcgtaaagtgctgctagccaacaacaaattg
attgaagaacagcgtattacccagcgaacccagtttgacctcgaaatgatgaatgagctg
ggctattgctccggtattgaaaactattcccgctatctttcgggccgtgggccgggagag
ccgccgccaacactatttgattatctgccatcagatggtctgctgattgtagatgaatcc
cacgtcaccatcccgcaaattggtggcatgtataaaggtgaccgctcacgtaaagaaaca
ttggtggagtatggcttccggctcccctcggcgctggataaccgcccaatgcgttttgaa
gagttcgaagcgctggcaccacaaactatctatgtttcggccactcccggcaaatatgag
ctggaaaaatccggtggcgatgttatcgaccaggtggtacgcccaaccggcttactggat
ccattgattgaggtgcggcctgtagccacacaggtggatgacttgctatcagagatccgc
attcgtgctgcaattaatgagcgggtgctggtcactacgctgaccaaacgcatggctgag
gacttaaccgagtatctggtagagcatggcgcgcgggtgcgttacctgcattcggatatt
gataccgtggagcgggttgagattatccgtgatttgcgcttgggtgagtttgatgtgctg
gtggggatcaacttattacgagaagggctggatatgccggaggtttctctcgtcgccatc
cttgatgctgataaagaaggtttcctgcgttctgagcgctccttgatccagaccattggt
cgcgcagcacgtaaccttaatggtaaagccattctttatggtgacagaattacggcttca
atggaaaaagccattggtgaaactgagcggcgtcgagccaaacagcaagcttacaatgaa
gagcgcggcattatcccacaggggctaaacaagaagatcggcgatattctgcaattgggt
caaccttctacccgtggcaaagggaaaggccggggtggcaaaatggctgataccaacaac
taccaatctctggcaccaaaagcgcttgatcagaaaatccgtgaattggaagcgaagatg
tacacccacgcgcaaaatcttgagtttgaacaggcggcagaattacgcgatcaggtgcat
cagttacgccagcagttcatcgctatatcttaa
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