Yersinia enterocolitica FORC_002: FORC2_3140
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Entry
FORC2_3140 CDS
T03890
Name
(GenBank) ATP-dependent dsDNA exonuclease
KO
K03546
DNA repair protein SbcC/Rad50
Organism
yef
Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_3140
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
FORC2_3140
Archaeal homologous recombinant proteins
FORC2_3140
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_23
SbcC_Walker_B
AAA_29
ABC_tran
cobW
Bac_DnaA
SMC_N
AAA_21
nSTAND3
NTPase_1
Motif
Other DBs
NCBI-ProteinID:
AKF39287
LinkDB
All DBs
Position
3522661..3526350
Genome browser
AA seq
1229 aa
AA seq
DB search
MRILSLRLKNINSLQGEWKIDFTAEPFASNGLFAITGPTGAGKTTLLDAICLALYHQTPR
LNVTPSQNELMTRHTAESLAEVEFEVKGTRYRAFWSQRRAKNSPEGNLQAPKVELALCEN
GKILADKVRDKLDMVAAITGLDFGRFTKSMMLSQGQFAAFLNADANDRAELLEELTGTDI
YGRLSEHVFEQHKQAKIALDALHQRASGIELLNEEQRADLAQQLEVLGEQEKQLASEQRV
NQKQINWLTGWQQQQKNVLEYQQQQKIIEQEYLQVQPELQRLARSEPAEKLRPLLRECSR
SLRDLQQIQLRITTLTQQQQQLQTQLTPLAQALEQANLARQQHATHQHEQEILIEQKVVP
LDNLIAQQQHSLMLLGTQLEQLRTKKQQSKQQLELNEQQFKLAHQRLQQLTEYTQQHAHH
QHWEKNLPLWREQFRQLQMQQQQSVESEQQLQQQATLLATLQQQIDTLNEQDKQQQAALV
QAHSQTGSIQQQLSALEQQQPSAQLRQQLIELQQQRPVRQQLAALSPLAQQVQALHDKQQ
QQFVAQQQQLQLLEQQLAEKRQLYKQHKQHLTDLETLLEREKQIVRLESERAKLQPGEAC
PLCGALDHPAITEYQAVKPSETAVRVEELRLQVEQLFTAGTELRTQVASMQQQQLHLEQE
LQHSQQQLTDYHQQWHALTQTLTLTFALNEPETLITWLEQQEQSEQTCQLKLAEYERLNQ
QYQQAKDILTQAEQQQQKHQQQLALISQRRQDAEQAHQKLHAQHQHQLVELAKTRQDFSH
ALAELSLSMPEADQQQSWLALREEENQRWHQYQQEQQQLALGQKALETQIENERRHLQEC
IDQLSILTQQYQQIETLLQQQKQQRQVLFGDRSVVEARQLLRQQQQKVELAQQNTAQALQ
QAQSQLNLLSGELTGLEQQCKQNQQRVTTAQAELRQALASSEFDDEAALTAALLSEEERQ
RLQQLQQQLSERQQQANIRHQQASEALAQLIQSCPDGVDQTSELAVLQRQSEQLLAQLKA
NTLRQGELRNQLESDIIRRRNQHALFEQIEHSQQQYDDWSYLNHLIGSKEGDKFRKFAQG
LTLDHLVYLANNQLSRLHGRYQLQRKTSDALELQVVDTWQADAIRDTRTLSGGESFLVSL
ALALALSDLVSHKTSIDSLFLDEGFGTLDAETLDTALDALDSLNASGKTIGVISHVEAMK
DRIPVQIKVKKVNGLGVSRLDNIFRVNQD
NT seq
3690 nt
NT seq
+upstream
nt +downstream
nt
atgagaattttaagtctacggctgaaaaacattaattctctacagggtgaatggaagata
gatttcaccgccgaaccttttgccagcaacggtttattcgcgataaccggcccgactggg
gcagggaaaaccactctgctcgatgccatttgtctcgcgttataccaccagaccccgcgg
ttgaatgtcacccccagccaaaacgaactgatgactcgccacacggcggagtcactggct
gaagtcgagtttgaggtaaaaggaacgcgttatcgtgctttctggagccaacggcgcgct
aaaaatagtccggaaggaaatctgcaagcgcctaaagttgagttggcgctatgcgaaaac
ggcaagattctggccgataaagtgcgcgataagcttgatatggttgccgcaatcaccggg
ctggattttggccgctttaccaaatcgatgatgctgtcacaggggcaatttgctgcattt
ctcaatgctgatgccaatgatcgcgcggaattattggaagagttaaccggcacggacatc
tatggtcggttgtctgaacacgtatttgagcaacataagcaagccaagatcgcactggat
gcattgcatcaacgcgccagcggtattgaactgctaaatgaagagcagcgtgcagatctg
gcgcaacaattagaggtactcggtgaacaagaaaagcagcttgcttcagaacagcgggta
aatcaaaagcaaataaattggctcaccggatggcagcaacagcaaaaaaatgtgttggaa
tatcaacagcagcagaaaatcattgagcaagaatatctgcaagtacaacccgaactgcaa
cgattggcccgtagtgaaccagcagaaaagttacgccccctattacgcgagtgttcccgt
agcctacgggatttgcagcagatacaactgcgcatcaccacactgacgcagcagcaacag
caacttcaaacacaactgacgccactagctcaggcgctggagcaagccaatcttgcccgc
cagcaacacgcaactcatcagcatgagcaagaaatactgatcgagcaaaaagtcgttccg
ctggataaccttattgctcagcagcaacactcattaatgctactaggtacgcaactggaa
cagttacgcaccaaaaaacagcaaagtaaacagcaacttgaactgaatgaacaacagttc
aagctagctcaccagcgcctgcaacaactgactgagtacacccagcagcatgcccaccat
caacactgggaaaaaaacctacctttgtggcgtgagcagttccgccaattacaaatgcag
caacaacaatcagttgaaagcgaacagcaattgcaacagcaggccacgttactggcgacc
ttacaacagcaaattgacacactgaatgaacaagataaacagcaacaagctgcattagta
caagcccactcgcagaccggtagtattcagcaacaattgtcagcacttgagcaacaacag
ccctccgcgcagttacgccagcaactcatcgagctacaacaacaacggccggtgcgacag
caattagcggcattatcgccattggcgcagcaagttcaggcgttgcatgataaacagcaa
cagcagtttgttgcccagcagcagcaactacaattactcgaacaacagctagcagaaaaa
cgtcagttatataaacaacacaaacagcatctgactgatctggaaactttgctggaacgc
gaaaaacaaatcgtccggttagagtctgaaagagccaaactgcaaccaggagaagcatgc
ccattatgtggtgcattggatcacccagccattactgagtatcaggcagtaaaaccctca
gaaacggcagtgcgagtagaagaactgcgacttcaggttgaacaacttttcactgcggga
actgaattacgcactcaggtcgcaagcatgcagcaacaacagttgcatctggagcaagag
ttacagcacagccagcagcaactgacagattatcaccagcaatggcatgcactgactcaa
acattaacgctaacatttgcgttgaatgaacctgagaccttaataacctggttggaacaa
caagaacaatcagagcaaacctgtcagctaaaactggcggaatatgaacgattgaatcaa
caatatcaacaagctaaagatattctgactcaagcagaacagcagcagcaaaaacatcag
cagcaattggccctaattagtcagcgccgacaagatgccgagcaagcgcaccaaaagttg
catgcacaacatcaacaccaactggttgaattggcaaaaacacgccaagactttagccat
gccctggctgaattatcgctatcaatgcctgaagcagaccaacaacagagctggctggca
ctgcgggaagaggaaaatcaacgctggcaccagtatcagcaggaacaacaacagttggcg
ctggggcaaaaagcactggaaacgcaaattgaaaatgaacgtcgccacttgcaagagtgc
attgatcagttgtccatactcacacaacaatatcagcaaattgagacactgttgcagcaa
caaaagcaacaacgtcaggtgctatttggtgaccgcagcgtggttgaagcccgccagtta
ttgcgccaacaacagcaaaaagtagaactggcccaacaaaatacagcacaagccctgcaa
caggcacaatctcaacttaacttgctctccggcgaactgacggggctagaacagcagtgc
aaacaaaatcaacaacgagtcactacagcccaagctgaattacgacaagcactggcaagt
agtgaatttgatgatgaggcagccttaaccgccgcgctcctgagtgaggaagaaaggcag
cgtttgcagcaattgcaacagcaactgagtgagcgccagcaacaggccaatatccgtcac
caacaagccagtgaagcattggctcaactgatacaatcttgccctgatggcgtcgaccag
acatctgagttggcggtattacagcggcaatcagaacaattactggctcaactgaaagcc
aataccttacggcaaggtgagttacgcaatcagctagaaagcgacataattcgccgccgc
aaccaacatgcactgtttgagcaaattgaacatagccagcaacaatatgatgactggagc
tatctcaatcacttaattggctctaaagaaggtgataaattccgcaagtttgcccaaggc
ttgacactcgatcatttggtctatctggcaaacaaccaactcagccgcctacatgggcgc
tatcaattacagcgtaaaaccagtgacgcgctggaactacaagtggtggatacctggcaa
gcggatgctatccgtgacacccgcaccttgtcagggggagaaagcttcctggtcagctta
gctctggctttggcgctatcagatctggtcagccataaaaccagtattgattccctattt
ctcgatgaaggcttcggtaccttggatgcagagacactggatacggcactcgatgccctt
gatagcctgaatgcatcgggtaaaaccattggagttattagccatgtcgaggcgatgaaa
gacagaatcccagtgcaaattaaagtgaaaaaagtcaacggattgggtgttagccgctta
gataacatcttccgagtcaatcaagactaa
DBGET
integrated database retrieval system
