KEGG   Yersinia enterocolitica FORC_002: FORC2_3371
Entry
FORC2_3371        CDS       T03890                                 
Name
(GenBank) 2'-5' RNA ligase
  KO
K01975  RNA 2',3'-cyclic 3'-phosphodiesterase [EC:3.1.4.58]
Organism
yef  Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:yef00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:yef03016]
    FORC2_3371
Enzymes [BR:yef01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.4  Phosphoric-diester hydrolases
    3.1.4.58  RNA 2',3'-cyclic 3'-phosphodiesterase
     FORC2_3371
Transfer RNA biogenesis [BR:yef03016]
 Prokaryotic type
  tRNA spricing factors
   Other tRNA splicing factors
    FORC2_3371
SSDB
Motif
Pfam: LigT_PEase 2_5_RNA_ligase2
Other DBs
NCBI-ProteinID: AKF39518
UniProt: A0AAD2UX03
LinkDB
Position
3815207..3815764
AA seq 185 aa
MINAVDKTIVNKRLFFALTLPDVLQQRIVQWRADNFPPETGRPIAAANLHLTLAFLGEVS
HAKAQVLQQQAGRINQSGFNVTLDDIGHWPGSGVVWLGCKNPPRGLLQLAQLLRSQAARS
GCYQTPLPFHPHVSLFRGAIRPVAIPAKTTNESFQADHFSLYESVYARGRTRYNMVQSWP
LADSE
NT seq 558 nt   +upstreamnt  +downstreamnt
atgattaatgctgttgataaaactatcgttaacaaacgtctgttttttgccctgacactg
cctgatgtcctgcaacagcgcattgtgcaatggcgagcagataactttccgccagaaact
ggccgccctattgctgcggcaaacctccacctgacgctggcatttctcggcgaggtcagt
cacgccaaagcacaggtcttacagcaacaagccgggcgcataaatcagtcaggttttaat
gtgacactggatgatatcggccattggcccggctccggagtggtatggctcgggtgtaag
aatccaccacgtgggttgttacagttggctcaattgctgcgctcccaagcggcacgcagc
ggttgttaccaaacaccgctgccatttcatcctcatgtctccttattccgcggcgctatt
cgacccgtcgccataccggctaaaaccaccaacgaaagctttcaggcggaccatttttcg
ttatatgagtcggtatatgcgcgtggccgcacgcgttataacatggtgcaaagctggccg
ctggctgacagtgaataa

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