Entry |
|
Name |
(GenBank) 2'-5' RNA ligase
|
KO |
|
Organism |
yef Yersinia enterocolitica FORC_002
|
Brite |
KEGG Orthology (KO) [BR:yef00001]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:yef03016]
FORC2_3371
Enzymes [BR:yef01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
FORC2_3371
Transfer RNA biogenesis [BR:yef03016]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
FORC2_3371
|
SSDB |
|
Motif |
|
Other DBs |
|
LinkDB |
|
Position |
3815207..3815764
|
AA seq |
185 aa
MINAVDKTIVNKRLFFALTLPDVLQQRIVQWRADNFPPETGRPIAAANLHLTLAFLGEVS
HAKAQVLQQQAGRINQSGFNVTLDDIGHWPGSGVVWLGCKNPPRGLLQLAQLLRSQAARS
GCYQTPLPFHPHVSLFRGAIRPVAIPAKTTNESFQADHFSLYESVYARGRTRYNMVQSWP
LADSE |
NT seq |
558 nt +upstreamnt +downstreamnt
atgattaatgctgttgataaaactatcgttaacaaacgtctgttttttgccctgacactg
cctgatgtcctgcaacagcgcattgtgcaatggcgagcagataactttccgccagaaact
ggccgccctattgctgcggcaaacctccacctgacgctggcatttctcggcgaggtcagt
cacgccaaagcacaggtcttacagcaacaagccgggcgcataaatcagtcaggttttaat
gtgacactggatgatatcggccattggcccggctccggagtggtatggctcgggtgtaag
aatccaccacgtgggttgttacagttggctcaattgctgcgctcccaagcggcacgcagc
ggttgttaccaaacaccgctgccatttcatcctcatgtctccttattccgcggcgctatt
cgacccgtcgccataccggctaaaaccaccaacgaaagctttcaggcggaccatttttcg
ttatatgagtcggtatatgcgcgtggccgcacgcgttataacatggtgcaaagctggccg
ctggctgacagtgaataa |