Yersinia enterocolitica FORC_002: FORC2_3650
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Entry
FORC2_3650 CDS
T03890
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
yef
Yersinia enterocolitica FORC_002
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
yef03016
]
FORC2_3650
Enzymes [BR:
yef01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
FORC2_3650
Transfer RNA biogenesis [BR:
yef03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
FORC2_3650
Prokaryotic type
FORC2_3650
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
AKF39797
LinkDB
All DBs
Position
complement(4165328..4166317)
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AA seq
329 aa
AA seq
DB search
MGRPRRRGRDINGVLLLDKPLGLSSNDVLQKVKRLFSANRAGHTGALDPLATGMLPICLG
EATKFSQFLLDSDKRYRVVARLGQRTDTSDAEGALISEREVNVTQAQMDAALDSFRGSSQ
QVPSMYSALKHQGKPLYEYARQGIEVEREARSITVYELLFIRWEGNDLELEIHCSKGTYI
RTIIDDLGELLGCGAHVSYLRRLQVATYPSDRMVTLEQLTAIVETAQAEERSPNAELDAL
LLPMDSAVLNFPEVNLLPAVASYVKQGQPVHVAGAPGEGMVRITEGEERNFIGIGTIAED
GRVAPKRLVVEHVDGANPVVASVAAGNTP
NT seq
990 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtccacgtcgtcgcggccgtgacattaacggcgttctgttattggataagccg
ctgggcctctcctctaatgatgttttgcagaaagtaaaacgtctctttagcgcaaaccgc
gcaggccataccggtgcactcgatccattggcgaccggtatgttacctatctgtttgggt
gaagcgaccaagttttctcaatttttgctcgattcagataagcgctatcgagtggttgcc
cgtttaggtcaacgcacggatacctcagatgccgaaggcgcattaatcagcgagcgtgaa
gttaatgtcacgcaggcacagatggatgccgcgttggacagtttccgtggtagcagccag
caggtgccgtccatgtattctgcgctgaagcatcaaggcaaaccgctgtatgaatatgcc
cgtcaggggattgaagtagaacgtgaagcgcgcagtattaccgtgtacgaactgctgttt
atccgctgggaaggcaatgacctggaactggaaatccactgttccaaaggcacctatatt
cgtaccattattgatgatttgggcgaattactaggctgcggcgcacatgtgagttatctg
cgtcggttgcaagtggcgacctatccaagtgaccgcatggtgacattggaacagttgact
gcaattgttgaaacagcgcaagcagaagagcggtcgccaaacgctgaactggatgcgttg
ctattaccgatggatagtgcggtattaaacttccctgaagtcaatctgttacctgctgtt
gcttcctatgtgaaacaagggcaaccagtacatgtagcgggagctcctggtgaagggatg
gtccgtatcaccgaaggtgaagagcgtaatttcattggtatcggtacgattgctgaagat
ggccgcgttgctccgaaacgtctggttgtagaacatgtggatggtgcaaaccctgttgta
gcaagtgtagcggcaggaaacacaccgtag
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