Yersinia enterocolitica FORC_002: FORC2_3905
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Entry
FORC2_3905 CDS
T03890
Name
(GenBank) DNA-dependent helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03420
Nucleotide excision repair
yef03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
FORC2_3905
03430 Mismatch repair
FORC2_3905
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yef03400
]
FORC2_3905
Enzymes [BR:
yef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
FORC2_3905
DNA repair and recombination proteins [BR:
yef03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
FORC2_3905
MMR (mismatch excision repair)
Other MMR factors
FORC2_3905
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PcrA_UvrD_tudor
UvrD_C_2
AAA_30
Viral_helicase1
AAA_22
PhoH
AAA_11
Motif
Other DBs
NCBI-ProteinID:
AKF40052
UniProt:
A0A0E1NJ75
LinkDB
All DBs
Position
complement(4454956..4457118)
Genome browser
AA seq
720 aa
AA seq
DB search
MDVSDLLDSLNEKQREAVAAPRCNLLVLAGAGSGKTRVLVHRIAWLLSVENASPYSIIAV
TFTNKAAAEMRHRIEHLIGTSQGGMWIGTFHGLAHRLLRAHHMDANLPQDFQILDSDDQL
RLLKRLVKALNLDEKQWPPRQAMWYINGKKDEGLRPQHIESYGNPVEATWLRIYQAYQEA
CDRAGLVDFAELLLRAHELWLNKPHILNHYRERFTNILVDEFQDTNNIQYAWIRLLAGDR
SNVMIVGDDDQSIYGWRGAQVENIQRFLKDFPGAETIRLEQNYRSTSNILTAANTLIANN
DGRMGKNLWTDGAQGEPISLYCAFNELDEARFVVNRIKAWQDNGGALNDCAILYRSNAQS
RVLEEALLQTAMPYRIYGGQRFFERQEIKDALAYLRLISNRNDDAAFERVVNTPTRGIGD
RTLDVIRQTARDRQLTLWQSTRAMLQEKVLAGRAASALQRFVELVDSLAHETADMPLHVQ
TDRVIRDSGLWSMYEQEKGEKGQARVENLEELVNATRQYSYQDEDQDLMPLQAFLSHAAL
EAGEGQADAYQDAVQLMTLHSAKGLEFPQVFIVGMEEGMFPSQMSLDEGGRLEEERRLAY
VGVTRAMQKLTLCYAESRRLYGKEVNHRPSRFIGELPQECVEEVRLRATVSRPVNHRRMG
TPMNENDSGFSLGQRVRHPKFGEGTIVNLEGSGEHSRLQVAFPGEGIKWLVAAYARLEAV
NT seq
2163 nt
NT seq
+upstream
nt +downstream
nt
atggacgtttctgatctgctcgacagcctgaatgaaaaacaacgtgaagccgtggccgcg
ccacgctgcaacctgttggtactggccggtgcgggcagtggcaaaacacgggtgctggtt
catcgtattgcctggctgctgtcggtagaaaatgcctccccatattcgattatcgcggtg
acctttaccaataaagcggcggccgaaatgcgccaccgtattgagcatttgattggcacc
agtcagggcggcatgtggattggcactttccacgggttggcgcaccggttgctgcgtgct
caccatatggatgccaatctgccgcaagatttccaaatcctcgacagcgacgaccaactg
cggttattgaagcgcttggttaaagccttgaatttagatgaaaaacaatggcctccacgt
caggcaatgtggtacatcaacggcaaaaaagacgaaggtctacgtccgcagcatattgag
agctacggtaatccggttgaagccacttggttgcgtatctatcaggcctatcaggaagct
tgtgaccgcgcgggcctggtggattttgccgagctattattgcgtgcacatgagctgtgg
ctgaataagccgcacattctgaatcactatcgcgagcgctttaccaacattttggtggat
gagttccaggataccaacaacattcaatatgcctggattcgcctgctggctggggatcgc
tccaatgtgatgattgtcggcgacgatgaccagtcaatttatggctggcgcggggcgcag
gtggagaatatccagcgcttcctgaaagattttcccggcgctgaaaccattcgattggag
cagaattatcgctcgaccagcaatattctgacggcggcaaacaccctgattgctaataat
gacggccgcatgggtaagaacttgtggactgatggggcgcaaggcgagcctatctcgctc
tattgtgcttttaacgagttggatgaagcccggtttgtggtgaatcgcattaaagcctgg
caagacaacggcggtgcgctgaatgattgtgccatcttgtatcgtagtaatgcccaatcg
cgtgttttggaagaggccttgttacaaacggcgatgccgtaccgtatttatggtggtcag
cgcttcttcgaacgtcaggaaatcaaagacgcactggcttatctgcgtctgatttccaat
cgtaacgatgatgctgcttttgagcgggtggtgaatacgccgactcgtgggattggtgat
cgcacattagatgttattcgccaaaccgcgcgtgaccgtcagttaaccttgtggcagtca
acccgtgccatgttgcaggaaaaagtgctggcaggccgtgcggcttctgcactgcaacgt
tttgtcgaactggtggattcactggcgcatgaaacagctgatatgccgctgcatgtccaa
actgatcgagtcattcgcgattctggcttgtggtcgatgtatgagcaggaaaagggcgaa
aaaggtcaggcgcgtgttgaaaaccttgaagaactggtcaatgcgacccgccaatacagc
tatcaggatgaagatcaggatctgatgccactacaggcatttctttctcatgcggcgctg
gaagccggtgaggggcaagcagatgcctatcaggatgcagtgcaattgatgactctccat
tcagcaaaagggctggagttcccgcaggtatttatcgtgggtatggaagagggcatgttc
ccaagtcagatgtcactggatgaaggtgggcgtctggaagaagaacggcggctggcctat
gttggggtcacgcgcgcgatgcagaaactgacactctgttatgccgagagccgccgcttg
tacggcaaagaagtgaatcatcggccatcacgttttatcggcgaattaccgcaagagtgc
gtcgaagaagtgcggctacgcgcgacggtctctcgcccggtaaaccaccgtagaatgggg
acgccgatgaatgaaaatgacagcggcttctcactgggtcagcgggtgcgacatcctaag
tttggtgaaggcactatcgtcaatttggaaggcagcggtgagcacagtcggttgcaagta
gccttccccggtgaagggattaagtggttggtggcggcttacgcacggctggaagccgtc
taa
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