Yersinia enterocolitica FORC_002: FORC2_3932
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Entry
FORC2_3932 CDS
T03890
Name
(GenBank) ATP-dependent RNA helicase RhlB
KO
K03732
ATP-dependent RNA helicase RhlB [EC:
5.6.2.7
]
Organism
yef
Yersinia enterocolitica FORC_002
Pathway
yef03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yef00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FORC2_3932
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yef03019
]
FORC2_3932
Enzymes [BR:
yef01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
FORC2_3932
Messenger RNA biogenesis [BR:
yef03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
FORC2_3932
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
ERCC3_RAD25_C
AAA_22
CCDC138_C
Motif
Other DBs
NCBI-ProteinID:
AKF40079
UniProt:
A0A0E1NK33
LinkDB
All DBs
Position
4487383..4488669
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AA seq
428 aa
AA seq
DB search
MSKTHLTEQKFSDFALHPLVIEALENKGFQYCTPIQALALPLTLSGRDVAGQAQTGTGKT
LAFLASTFHYLLSHPAEEGRQTNQPRALIMAPTRELAVQIHSDAESLSQVTGLKLGLAYG
GDGYDKQLKVLESGVDILIGTTGRLIDYAKQNYINLGAIQVVVLDEADRMYDLGFIKDIR
WLFRRMPSVDKRLNMLFSATLSYRVRELAFEQMNNAEYVEVEPLQKTGHRIQEELFYPSN
EEKMRLLQTLIEEEWPDRCIIFANTKHRCEEIWGHLAADGHRVGLLTGDVAQKKRLRILE
DFTKGDLDILVATDVAARGLHIPLVTHVFNYDLPDDCEDYVHRIGRTGRAGESGHSISLA
CEEYALNLPAIETYTGHSIPVSKYNSDALLTDLPAPKRLARTRTGNGPRRNSAPRRSGAP
RNNRKRPS
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgagcaaaacacacttgaccgaacagaagttttccgacttcgccctgcacccgctagtt
attgaagcccttgaaaacaaagggtttcagtattgtacgccgatccaggcgttagcattg
ccactcaccctctctgggcgtgatgtagcaggtcaggcgcaaacaggaaccggcaagacg
ctggcattcttagcgtctactttccattatttgctttctcaccccgcagaagagggtcgt
cagactaatcaaccgcgcgcattgattatggcaccaacgcgtgaattagctgtgcaaatt
cactccgatgcagagtcactttcccaagtaaccggcctgaaattaggtttggcttatggt
ggtgacggctacgacaaacagcttaaagtgctggaaagtggcgtagatattcttatcggg
actactggccgtttaatcgattacgcaaaacaaaattatattaatctcggtgcgattcag
gttgtggtattggatgaagctgatcggatgtacgatttaggctttattaaagatatccgc
tggctgttccgccgtatgccttccgttgataagcgtttaaacatgctgttctctgccaca
ctttcgtaccgcgtacgtgaattggctttcgaacaaatgaacaacgccgaatatgttgaa
gtggaaccgttacaaaaaaccggccaccgcattcaggaagagctgttctacccttcaaat
gaagaaaaaatgcgtctgcttcagacgttgattgaagaagagtggccagatcgctgcatt
atttttgccaataccaaacatcgttgtgaagaaatctggggccacctggctgccgatggt
catcgtgtcggtctattgaccggtgatgtcgcacagaaaaaacgcctgcggattttagaa
gatttcaccaaaggtgatttggatatcctggttgcaactgatgttgcggctcgtggtttg
catattccgctggtaacccacgtctttaactatgacctgcctgatgattgtgaagactat
gttcaccgcattggccgtaccggtcgtgctggcgaaagtggtcattccatcagcctggcc
tgtgaagaatacgcattaaacttaccggctatcgagacctataccggtcatagcattccg
gtgagtaaatataatagcgatgcgttattaactgatttgccggcgccaaaacgtctggcc
cgtacccgcaccgggaatggcccacgtcgtaactctgccccacgtcgcagtggtgcacca
cggaataaccgtaagcgaccgagctga
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