Yersinia entomophaga: PL78_01380
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Entry
PL78_01380 CDS
T09771
Name
(GenBank) deoxyribodipyrimidine photolyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
yeg
Yersinia entomophaga
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yeg03400
]
PL78_01380
Enzymes [BR:
yeg01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
PL78_01380
DNA repair and recombination proteins [BR:
yeg03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
PL78_01380
Prokaryotic type
PL78_01380
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ANI28490
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All DBs
Position
280779..282215
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AA seq
478 aa
AA seq
DB search
MTTHLVWFRHDLRVTDNLALHAACEDPQAQVQAVFIATPGQWASHDMAPRQAAFIHQNLQ
LLRQQLALRGIPLHYHQCHDFDASVDWLANLCIEQRIDKLLYNHQYELNERLRDTQLEEK
LRGQVICQGFHDSLLLPPGSVLTGNGEMYKVYTPFRRAFIQRLLMTDCNCVPAPQPRQSP
MDDSSALAPFNYPAAEVDAELFPAGEEAALRRLRQFCRETVQDYQKQRDLPAVDGTSQLS
PYLALGVLSPRQCFNRLRAECPNVLDMPDGGAFNWLNELIWREFYRHLLVAYPRLCRNRP
FIDWTDEVRWNPADDKLQAWQQGLTGYPIVDAAMRQLNATGWMHNRLRMITASFLVKDLL
LDWRLGERYFMSQLLDGDLAANNGGWQWAASTGTDSAPYFRIFNPTTQGERFDKQGTFIR
RWLPELAAVPESDIHQPWRWAQWQQPLDYPQPIVDHKQARLDTLAAFEAARREHSRTT
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgactacccatttggtctggtttcgccacgatttgcgcgttaccgataatttggccctg
cacgcggcctgtgaagacccgcaggcgcaggtgcaggccgtatttatcgctacgccgggg
cagtgggcatctcacgatatggcgccgcggcaggccgcatttattcatcaaaacctacaa
ttacttcgacagcaactcgcgctgcgtggtatcccattgcattaccatcaatgccatgat
ttcgacgcttcagtagactggttagccaatctttgtattgaacaacgcattgataaactg
ctttataatcatcaatatgaactgaacgaacgactgcgggatacgcagctggaagaaaag
cttcgtgggcaagtcatctgtcagggtttccatgacagcctgttattgccgccgggaagc
gttctgaccggcaacggcgaaatgtataaggtttacaccccatttcgccgtgcttttatc
cagcgcttgttgatgactgactgcaactgcgtgccagccccacaaccgcggcagtcgcca
atggatgactcatctgcgctcgcaccttttaattatcctgcagcagaagtggacgctgag
ctctttcccgcgggagaagaggccgctttacgccgccttcgccaattttgtcgcgaaact
gtgcaggattatcagaaacagcgagatttgccggcagttgacggaaccagccaattatcg
ccttatctggctcttggcgtgctgtctccgcgccaatgtttcaatcgactgcgagcagaa
tgccccaacgtgctggacatgccggacggtggcgcattcaattggcttaatgaattgatc
tggcgagaattttatcgccatctattggtggcttatccgcgattatgccgaaatcgtccg
tttattgactggacggatgaggtacgatggaaccctgctgacgataagttgcaagcgtgg
caacaaggcctgaccggctatccgattgtggatgcggcgatgcgacagctaaatgctacc
gggtggatgcataatcgcttgcgtatgattaccgccagctttttggtcaaagacctgctg
ctggattggcgtttaggcgagcggtattttatgtctcagttgttggatggcgatctggct
gccaataacgggggctggcaatgggccgcgtcaacggggacagattctgccccgtatttt
cgtattttcaaccccacgactcaaggggaacggtttgataaacaaggcacttttatccgc
cgttggctaccggagttagcggcggtgccggaaagtgatattcaccagccttggcgttgg
gcgcagtggcaacagccgcttgattacccgcagccgatcgtcgatcacaaacaagccaga
ttggacacgttggccgcatttgaggccgccagacgggaacattcccgcacaacataa
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