Yersinia entomophaga: PL78_03070 Help Entry PL78_03070        CDS       T09771                                  Name (GenBank) ribonuclease E   KO K08300   ribonuclease E [EC:3.1.26.12] Organism yeg  Yersinia entomophaga Pathway yeg03018   RNA degradation Brite KEGG Orthology (KO) [BR:yeg00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     PL78_03070  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:yeg03019]     PL78_03070    03009 Ribosome biogenesis [BR:yeg03009]     PL78_03070 Enzymes [BR:yeg01000]  3. Hydrolases   3.1  Acting on ester bonds    3.1.26  Endoribonucleases producing 5'-phosphomonoesters     3.1.26.12  ribonuclease E      PL78_03070 Messenger RNA biogenesis [BR:yeg03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Ribonucreases      PL78_03070 Ribosome biogenesis [BR:yeg03009]  Prokaryotic type   rRNA processing factors    PL78_03070 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  RNase_E_G RNase_E_G_Thio PNPase_C S1 Motif Other DBs NCBI-ProteinID:  ANI28822 LinkDB All DBs Position complement(668144..671695) Genome browser AA seq 1183 aa AA seqDB search MLINATQQEELRVALVDGQRLYDLDIESPGHEQKKANIYKGKITRIEPSLEAAFVDYGAE RHGFLPLKEISREYFPSNYSSHGRPNIKDVLREGQEVIVQVDKEERGNKGAALTTFISLA GSYLVLMPNNPRAGGISRRIEGDDRTELKEALSSLQLPDGMGLIVRTAGVGKSADALQWD LSFRLKHWDAIKKAAEGRPAPFLIHQESNVIVRAFRDYLRPDIGEILIDNPKILDLAKEH IAALGRPDFSSKIKLYSGEIPLFSHYQIESQIESAFQREVRLPSGGSIVIDTTEALTAID INSARATRGGDIEETAFNTNLEAADEIARQLRLRDLGGLIVIDFIDMTPVRHQREVENRL RDAVRQDRARIQIGRISRFGLLEMSRQRLSPSLGESSHHVCPRCSGTGTVRDNESLSLSI LRLIEEEALKENTHEVHAIVPVQIASYLLNEKRESVNAIEKRQGGVRAVIVPNDQMQTPH YSVLRVRKGEEVPTLSYLLPKLHEEEMAQPLEEAPMERKRPEQPALATFSLPTEVPPEAE PAAAAKPAVQPAKAAVSAAQPGLFSRLISGLKSLFAAPAEAEVKPAVVEKTENTDNRRQD RRNPRRQNNGRKDRGDRTPREGRENTRENARDNGNRDANRDNRDIREGREGREDQRRNRR SNQQNTAVEATVENRDNDKAPREEQQPRRERGDRQRRQRQNPQEVKAAEVVESVVAVNLV EEVQPEQEERQQVMQRRQRRQLNQKVRIQSANDELNPADTASEKTPVVKIAEQTAAPVVA QEEVKLLAPAADEDNGNDRSANNENGMPRRSRRSPRHLRVSGQRRRRYRDERYPTQSAMP LAGAFASPEMASGKVFIRYPVALPQEQQVAEPAAENIAENLNTQAAETPAVIAAPAVTTG QANSVAASPAIEQTVAVPAVVAEPAVIEAPKAEKPVEAFTPAPAAYKHQPGGSSSSAAAV PGRAPVAAPVVEAPVVKTVAVETAEVKTVEMETAGVETTKAETPVNQPAAQAVVQPEVTA QPAVEEIAAKAVTIEDVVAETLAVEAPFEAHTETIVSATDAVEETAPTTKAVVEENVAET VVAEVTATQAAPETPVVDAPKTVEVAATVVTEAVVHPEGVRFKHHAFAPMTKAPASASTQ ATQASAHSEWQRPAFDFAGKGSAGAHAAVNKATAPATKPQPVK NT seq 3552 nt NT seq  +upstreamnt  +downstreamnt atgttgattaacgcaactcagcaggaagagttgcgtgttgcccttgtagatggacagcgg ctttatgatctggatattgaaagtccgggccatgagcaaaaaaaagcgaatatttacaaa ggtaaaatcacccgaattgagccaagtctggaagctgcttttgttgattacggtgcagaa agacatggtttccttcctttaaaagaaatctctcgcgagtacttcccaagtaattattcc tctcatggccgtccaaacatcaaagatgtattgcgcgaaggccaggaagttattgttcag gttgataaagaagaacgtggtaataaaggcgcagccttaaccacatttatcagtctcgct ggcagctatttagttctgatgcctaataacccgcgtgccggtggcatttctcgccgcatc gaaggtgacgaccgtactgaactaaaagaagccctgtcttcactccagttgcctgacggc atggggctgattgtccgtacggctggcgtaggcaaatctgccgacgcgctgcaatgggac ttgtcattccgcctgaaacactgggatgcgattaaaaaagccgccgaaggccgccctgct ccgttcctgattcatcaggaaagcaacgttatcgtgcgtgccttccgcgattacctgcgc ccggacatcggcgaaatcctgatcgacaatccaaaaattctcgatctggccaaagagcat attgccgctctgggtcgcccggatttcagcagcaaaatcaaattgtacagcggcgaaatc ccgttgttcagccactatcagattgaatctcagattgaatctgcgttccagcgcgaagtg cgtttgccttccggcggttctatcgttatcgataccaccgaagcgttgaccgcgattgat atcaactccgcacgcgctactcgcggcggcgacatcgaagaaacggctttcaataccaac ctggaagcggcggacgaaatcgctcgccaattgcgtctgcgtgacctcggcggcctaatc gttatcgactttatcgatatgacgccggttcgccatcagcgtgaagtagaaaaccgtctg cgtgacgccgttcgtcaagaccgcgcccgtattcagatcggccggatttctcgcttcggt ctgctggaaatgtcccgtcagcgccttagcccgtcactgggtgaatccagccaccacgtc tgcccgcgttgcagcggcaccggcaccgtgcgtgacaatgaatctctgtcgctgtcgatt cttcgtctgattgaagaagaagcgctgaaagagaatacccatgaagttcacgctatcgtt ccagtccagattgcctcttatctgctgaatgaaaaacgtgaatcggttaatgccattgag aagcgtcaaggcggcgtgcgtgcagttatcgtacctaacgaccagatgcaaaccccgcat tactcggtgctgcgcgtacgtaaaggtgaagaagttccgaccctgagctacctgctgccg aaactgcatgaagaagagatggctcagccactggaagaagcgccaatggaacgcaaacgt ccggaacaaccggcgctggcgaccttctctctgccaacggaagtgccaccggaagctgaa cctgcggcagcggccaaacctgcggtgcagccagcaaaagcagccgtcagtgccgcacag ccgggtctgtttagtcgcttgattagcggtctgaaaagcctgttcgccgcaccagctgaa gcggaagtgaaaccggctgtcgtcgaaaaaaccgaaaataccgataatcgtcgtcaagat cgtcgtaatccgcgccgtcagaacaatggccgcaaagatcgcggtgaccgcacgccgcgt gaaggtcgcgaaaatacgcgtgaaaacgcgcgtgacaacggcaatcgggatgcaaaccgc gataatcgtgacatccgtgaaggccgtgaaggccgtgaagatcagcgtcgtaaccgtcgt tctaaccagcaaaataccgcggttgaagctacggtagaaaatcgcgacaacgacaaagcg ccacgggaagaacagcaaccgcgtcgtgaacgtggcgatcgtcaacgtcgtcaacgtcag aatccgcaggaagtgaaagcggctgaagtggttgaaagcgttgtagcggtaaatctggta gaagaagtccagcctgagcaggaagaacgccaacaggtgatgcagcgtcgtcagcgtcgt caattgaatcaaaaagtacgtattcaatcggccaatgatgaactgaacccagcggatacc gccagtgaaaagactcctgttgttaaaatcgccgagcaaaccgcggctccggttgttgca caggaagaagtgaaactgttagcaccagcagcggatgaagacaacggtaacgatcgttct gccaataacgagaatggtatgccacgtcgttcacgccgttcaccacgtcacctgcgtgtc agtggtcaacgtcgtcgtcgctatcgtgacgagcgttatccaacccaatccgctatgcct ctggccggggcgtttgcctctccggaaatggcgtcaggcaaggtgtttattcgttatccg gttgcactgccgcaggaacagcaagttgctgagccagcagcggaaaatatcgcagaaaac ctgaatacccaagcggctgaaacacctgctgtgatcgcagcaccggcagtcaccaccggt caggcgaattcggttgctgcatcgccagcgattgaacaaaccgtggcggtaccagccgtt gtcgctgaacctgctgtgattgaagcgcctaaagctgaaaaaccggttgaagcgttcacg ccagcgcctgcggcttacaaacatcagccaggtggttcatcttcatcagctgctgccgta ccgggccgcgcgccagttgctgctccagtcgttgaggcgcctgtagtcaaaactgttgca gttgaaactgctgaagttaaaactgttgaaatggaaactgctggcgttgaaacgacgaaa gctgaaactccggttaaccagccagcagcgcaagcggttgttcagccagaagtgacggct caacctgcggttgaagaaatcgcagcgaaagcggtcactatagaagacgttgttgccgaa accctggctgttgaagcaccgtttgaagctcataccgaaaccattgtcagcgcaactgac gcagttgaagaaaccgcgccaacaacaaaagctgtggtagaagagaatgtggctgaaacc gttgttgctgaagtgactgcgacgcaagcagcgccggaaacgccagtagttgatgcaccg aaaaccgttgaagtggccgctaccgtagtgaccgaagcggttgttcatccggaaggcgtg cgcttcaaacatcatgcattcgctccgatgaccaaagcaccggcttctgcctcaactcag gctacgcaagcgtcagctcacagtgaatggcaacgccctgcgttcgactttgcaggtaaa ggctctgcgggcgcgcacgcggcagtgaacaaggctacggcaccggctaccaagcctcag ccagtcaagtaa

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