Yersinia entomophaga: PL78_06495
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Entry
PL78_06495 CDS
T09771
Name
(GenBank) exonuclease SbcD
KO
K03547
DNA repair protein SbcD/Mre11
Organism
yeg
Yersinia entomophaga
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
yeg03400
]
PL78_06495
DNA repair and recombination proteins [BR:
yeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PL78_06495
Archaeal homologous recombinant proteins
PL78_06495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SbcD_C
Metallophos
Metallophos_2
Terminase_3
PRORP
ATPgraspMvdD
Motif
Other DBs
NCBI-ProteinID:
ANI29488
LinkDB
All DBs
Position
1435224..1436453
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AA seq
409 aa
AA seq
DB search
MRIIHTSDWHLGQYFFTKSRAAEHQAFLRWLIQKVEEHQVDALIVAGDIFDTGSPPSYAR
ELYNRFVVDLQPTGCQLVVLGGNHDSVATLNESRELLAYLNTKVIAHASNDLEQQVFILH
DREDQPGAILCAIPFLRPRDLIASQAGESGSQKQLALQEAIAAHYQQLYQTAVNLRKRLA
LPLPIIATGHLTTVGVSTSDSVRDIYIGTLDAFPAQAFPPADYIALGHIHRAQQVAKSEH
IRYSGSPIPLSFDELNKEKSVFLVEFSGQSLAGVETLTVPQWQPMQLIKGDLRQIEQQLA
AFSQLSGPPVWLDIEVATQDYLSDIQRRIQALTENLPVEVVLLRRSKEQRQNSIHQQEKE
TLNELSVSDVFERRLALETELTEQRQQKMREMFQQVVDEVTLNADAREE
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgcgcattatacatacctcagactggcacttaggccagtatttcttcaccaaaagccgg
gcggcggagcatcaggcttttttacgctggctaatccaaaaagttgaagaacatcaggtt
gatgcgttaattgttgccggcgatatcttcgacacaggttcgccaccgagctacgcccgc
gagttatataaccggtttgtggtcgatcttcagccgacgggctgtcagttagtggttctt
ggcggtaaccatgattctgtcgcaaccttaaatgagtcacgcgaactgttggcctatctc
aataccaaggtgattgcccacgccagcaacgatctggaacaacaggttttcattctacac
gatcgtgaagatcagcccggagccattctgtgtgcgatcccttttctacgcccaagagat
ctgatcgccagtcaggcgggagaatccggatcgcaaaaacaattagcactacaagaagcc
atcgcggcacattatcagcagctttatcaaacggcggtcaacctgcgcaagcggctagca
ttacccttgcccattatcgccacgggtcacttaacgaccgtaggcgtcagcacctccgac
tcagttcgagacatttatatcggcacgcttgacgccttccctgctcaggctttccccccc
gctgattatatcgctctgggccatatccaccgcgctcagcaggtagcaaagtcggagcat
attcgctatagcggctccccgattcctctcagttttgatgaactgaataaagagaagagc
gtatttttggtggagttctcagggcaaagccttgccggggtggagactctgactgtcccg
cagtggcaaccgatgcaattaatcaaaggggatttacggcagatagagcagcagctcgct
gcctttagccaactttccggcccaccggtatggctggatattgaagtcgccacccaagac
tatctcagcgatattcagcgacgcattcaggcattgacggagaatctcccggttgaagtg
gtactcctgcgccgcagtaaagagcagcgccaaaacagtattcatcagcaagagaaagaa
acgttgaatgagctaagcgtcagcgacgtattcgaacgtcgcctcgcgttagaaacggag
ctgaccgaacaacggcagcagaaaatgcgggaaatgtttcaacaagttgtcgatgaagtc
acgctgaatgccgatgcaagagaagaataa
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