Yersinia entomophaga: PL78_07370
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Entry
PL78_07370 CDS
T09771
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
yeg
Yersinia entomophaga
Pathway
yeg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
PL78_07370
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
yeg03019
]
PL78_07370
03400 DNA repair and recombination proteins [BR:
yeg03400
]
PL78_07370
Enzymes [BR:
yeg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PL78_07370
Messenger RNA biogenesis [BR:
yeg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
PL78_07370
DNA repair and recombination proteins [BR:
yeg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
PL78_07370
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Peptidase_S66
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
ANI29649
LinkDB
All DBs
Position
complement(1621681..1623510)
Genome browser
AA seq
609 aa
AA seq
DB search
MSTAAVINKEQLAAQVLRETFGYQQFRPGQQEIINATLAGQDCLVVMPTGGGKSLCYQIP
ALVMDGLTLVVSPLISLMKDQVDQLQAYGVAAGCLNSSQTREQQLAVMEGCRSGQIKLLY
IAPERLVMENFLEQLEHWRPALLAVDEAHCISQWGHDFRPEYRALGQLKRRFPALPVIAL
TATADEATRGDIVRLLDLNQPLIQVSSFDRPNIRYTLVEKFKPLDQLWRFVQDQRGKSGI
IYCNSRAKVEDTTARLQSRGLSVAAYHAGLDNERRAQVQEAFQRDDLQVVVATVAFGMGI
NKPNVRFVVHFDIPRTIESYYQETGRAGRDGLPAEAILLYDPADMAWLRRCLEEKPAGAQ
QDVERHKLNAMGAFAEAQTCRRLVLLNYFGEGKQQACGNCDICLDPPKRYDALGDAQKAL
SCVYRVGQRFGLGYIVEVLRGANNQRIREMGHDKLSVYGIGRDQTHEHWVSVLRQLIHLG
LLSQNIAQFSALQLTEAARPILRAEIPLQLAVPRIQSLKPRSSANQKSYGGNYDRKLFAK
LRKLRKSIADEENIPPYVVFNDATLLEMAEQMPIKASELLSVNGVGQRKLERFGAPFMAM
IRDHVDNDE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtgtctaccgcggcagtgataaataaggaacagctggcagcgcaggtcttgcgagagact
ttcggctaccaacaattccgaccagggcaacaagaaatcatcaatgcaacgctcgccggg
caggactgtctggtggtgatgccgacgggcggcggaaaatccttgtgttatcagatcccg
gcgctggtgatggatggcttgacgctggtggtttctccgctgatttcactgatgaaagat
caggttgaccaacttcaggcctacggcgtcgccgcgggttgtctcaattcatcacaaact
cgcgagcagcaactggccgtgatggaaggttgccgcagtggtcagattaaactgctgtat
atcgctcccgagcgcttagtgatggaaaacttcctcgaacagcttgagcattggcgtccg
gcgctgctggcggttgatgaggctcactgtatttcccaatggggacacgatttccgcccg
gaatatcgcgctctgggtcagctcaaacgtcgttttcccgcgttgccagttattgctctc
accgccacggcggatgaagccacgcgcggcgatattgttcggttgctggatcttaatcag
ccgctgattcaggtcagcagtttcgatcggcccaatattcgctataccttggttgagaag
ttcaagccgctggatcagctctggcgctttgtgcaggatcaacgtggtaaaagcggcatt
atttactgcaatagtcgggctaaagttgaagataccactgcgcgtctacaaagccgcggc
ctgagcgtggccgcgtatcacgccggtctggataacgaacgacgggcccaggttcaggaa
gcgtttcagcgcgatgatttacaggtggtggttgccaccgtggcttttgggatgggtatc
aacaagccaaacgtccgttttgtggtgcattttgatattccgcggactatcgaatcttat
tatcaggaaacggggcgcgccgggcgtgatggcctgcctgcggaagcgattttactttat
gatccggcggatatggcgtggttgcgccgctgtctggaagaaaagcctgccggtgctcag
caggacgtcgaacgtcataaactgaatgccatgggggcttttgccgaagcgcaaacctgc
cgccgtttggtattgctaaattattttggcgaagggaaacaacaggcctgcggcaactgt
gatatctgccttgacccgccgaaacgttatgacgcgctgggtgacgctcaaaaagcctta
tcctgcgtgtatcgcgttgggcaacgctttggtttgggctatatcgtggaagtgctgcgt
ggagcgaataatcagcgtattcgcgaaatggggcacgataaactttcggtgtacggcatt
ggccgggatcaaacccatgagcattgggtgagcgttctgcgccagttaatccatttaggc
ttactcagccagaatatcgcgcagttttccgccctgcaattaaccgaggccgccagacct
attttgcgtgccgaaattccgctgcaactggcggtgccgcgcattcaaagcctgaaaccg
cgcagcagcgctaatcagaagtcctacggcggcaattacgatcgcaaactgtttgccaaa
ttgcgcaaactgcgtaagtccattgctgacgaagaaaacattccgccttatgtcgtcttt
aacgatgcgacgctgctggaaatggcggagcagatgccgattaaggccagcgaattgctc
agcgtcaacggcgtagggcagcgtaaactggaacgtttcggcgcgccatttatggcgatg
attcgcgatcatgtggataacgatgaatag
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