Yersinia entomophaga: PL78_08575
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Entry
PL78_08575 CDS
T09771
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
yeg
Yersinia entomophaga
Pathway
yeg03030
DNA replication
yeg03430
Mismatch repair
yeg03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
yeg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PL78_08575 (dnaE)
03430 Mismatch repair
PL78_08575 (dnaE)
03440 Homologous recombination
PL78_08575 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
yeg03032
]
PL78_08575 (dnaE)
03400 DNA repair and recombination proteins [BR:
yeg03400
]
PL78_08575 (dnaE)
Enzymes [BR:
yeg01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
PL78_08575 (dnaE)
DNA replication proteins [BR:
yeg03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
PL78_08575 (dnaE)
DNA repair and recombination proteins [BR:
yeg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
PL78_08575 (dnaE)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
ANI29873
UniProt:
A0ABN4PS33
LinkDB
All DBs
Position
complement(1890379..1893861)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKIGPLVKRAAALGMPALAITDFTNLCGLVKFYGSAHGA
GIKPIIGADFCVQSEMLGDEFAHLTILARNNEGYQNLTLLISEAYQRGYGPAGPVIDRDW
LIKHREGLILLSGGRMGDVGKFLLRGNQAQVDQCLDFYNEYFPGSYYLELIRTGRQDEEN
YLHVAVALATERGIPVVATNDVRFIDETDFDAHEIRVAIHDGFTLVDPKRPKNYSPQQFM
RDEEQMCELFADIPEALINSVEIAKRCNVTIRLGEYFLPQFPTGDMSTEDFLIEKSKQGL
EERLEFLFPDPEVRAQKRPEYDERLDIELKVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDLVIEHVAE
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLIPPDPGMTLEKAFAAEPQ
LPEIYEADEEVRALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDAEGNNPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINARRAKTGLEPIDIASIPLEDKKSFDML
QRSETTAVFQLESRGMKDLIKRLKPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
LSYPDIQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYSLGGADMLRRAMGKKNPAEM
AKQRSVFEDGAKSQGIDGELAIKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDEGEIVYGIGAIKG
VGEGPIEAMLEARNQGGYFKDLFDLCARVDTKKLNRRILEKLIMSGAFDRLGPHRAALMS
SLGEALKAADQHAKAEAIGQADMFGVLADAPEQVEQSYANVPRWQEQVVLDGERETLGLY
LTGHPITQYLKEIERYTGGLRLKDMHPTDRGKMTTAVGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMMFTDALEKYQHLLEKDRILIASGQVSFDDFSGGLKMTARELMDISEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQREDARARLRFGATWRVTPTD
RLLIDLRTLVGNEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggccgaacctcgttttgtccacctgcgtgttcacagcgattattccatgatcgatgga
ttagccaagattggacccttggtgaagcgggctgccgccttaggcatgccagcgttagcg
attactgactttaccaacctgtgcggtttggtgaagttttacggcagcgctcacggcgcg
ggaatcaaacctatcattggcgctgatttctgtgtgcagagcgagatgctgggcgatgag
tttgcgcatctgactattctggcgcgtaacaacgaaggctatcaaaaccttaccctgctt
atttccgaggcttatcagcgtggctatggccccgcagggccggttatcgatcgtgactgg
ctgattaagcaccgcgaagggctgattttgttgtccggcggacgtatgggcgacgtaggc
aaatttttgctgcgtggcaatcaggctcaggtcgatcaatgtcttgatttttacaatgaa
tacttccctggtagctactatttagagctaatccgtactggacgacaggacgaagaaaat
tatctgcacgtagcggtagcattagcgactgaacgcggtattcccgtggttgccaccaac
gatgtgcgctttattgatgaaacggattttgatgcccatgaaattcgcgtggcgattcat
gatggcttcactttggtcgatccgaaacgaccaaaaaattatagtcctcagcagtttatg
cgcgatgaagagcagatgtgcgagctgttcgcggatattcctgaagcgctgatcaacagc
gttgaaattgccaaacgttgtaacgtgacaattcggctgggtgaatatttcctgcctcaa
ttcccgaccggggatatgagtaccgaagattttctgatcgaaaaatccaaacagggtctg
gaagaacgtctggaatttttattcccggatccggaagtcagggcgcaaaagcggcctgaa
tatgatgaacgtctggatatcgagcttaaagttatcaaccagatgggattcccaggctac
ttcctgatcgtgatggagtttatccagtggtcgaaagataacggcgtaccggttgggccg
gggcgtggttcaggtgcaggttctctggtggcttatgccctgaaaatcaccgatctggat
ccgctggaatttgatctgctttttgaacgattcctgaaccctgaacgtgtatccatgccc
gatttcgacgtcgatttctgtatggaaaaacgcgatctggtgattgagcacgttgctgaa
atgtatggccgtgacgcggtttcgcagattattaccttcggtacgatggccgctaaagcg
gtaatccgcgacgttggccgggtgctgggccatccctatggttttgtcgatcgtatttcc
aaattgattccgcccgatccggggatgacgctggaaaaagccttcgccgccgagccacag
ttacctgaaatttacgaagcggacgaagaagttcgagccttgatcgatatggcgcgtaaa
ttggaaggtgttacccgtaacgccggtaaacacgccggtggggtagttatcgcgccgacc
aaaattaccgattttgcgccgctatattgcgacgccgaggggaataacccggttactcag
ttcgataaaaatgatgtcgaatatgccggtttagtgaagtttgacttcctcggtttgcgt
actctaaccatcattaactgggcgctggagatgatcaacgcccgtcgcgccaagaccggg
ctggaacccatcgatatcgcgtccattccgctggaggataaaaagagctttgatatgctg
caacggtcggaaacgacggcggtattccagctcgaatcccgcgggatgaaggatctgatt
aaacgcctgaaacccgactgcttcgaagatatgatcgccttggtggcgctgttccgccca
ggaccgttgcaatcaggcatggtagataactttattgaccgtaagcacggtcgcgaagag
ttgtcctatccagatatccaatggcagcatgaatctctgaaaccggtactagagcctacc
tacggcattattttgtaccaagaacaggttatgcagatcgctcaggtgctgtcgggctac
tccctcggcggggcggatatgctacgccgcgcaatgggtaagaaaaatccggcggaaatg
gccaagcagcgttccgtgtttgaagatggagctaaaagtcagggtattgacggcgaactg
gcgattaagatcttcgatctggtagaaaaatttgcgggttacggttttaacaaatctcac
tctgccgcctacgcgttggtttcctatcagactttgtggctgaaagcacattatccggct
gaatttatggctgcggtaatgaccgctgatatggataatacagagaaagtcgttggtttg
gtggatgagtgctggcgcatggggctgaaaatcctgccgccggatataaacagcgggctg
tatcatttccatgtgaacgatgaaggcgagatcgtttacggcattggcgctatcaaaggc
gtgggcgaaggcccaatcgaagctatgctggaagcccgcaaccaaggcggctactttaaa
gatctgttcgatttatgtgcgcgggttgataccaaaaaactgaatcgacggattctggaa
aaactgataatgtccggcgctttcgatcgtctcggtccgcatcgtgcggccttgatgagc
tctctcggagaagcgctgaaagcggcagatcagcatgccaaagcggaagctattggtcag
gcagatatgttcggcgtactggcggatgcgcctgagcaggtcgagcaatcttatgctaac
gtaccgcgctggcaggaacaggtggttcttgacggtgagagggagacgctggggctgtat
ttaaccggtcacccgattacccagtatctaaaggaaatcgagcgttataccggtgggttg
cgcctgaaagatatgcacccgacggatcggggcaaaatgacgacagcagtggggctggta
atcgctgcgcgcgtgatggtaacaaaacgcggaaatcgtatcggcatctgtacgctagat
gaccgttccgggcgtctggaagtgatgatgttcacggatgcgttggaaaaatatcagcat
ttgttagaaaaagaccgtatcctgatagccagtgggcaggtcagctttgatgactttagc
ggtggacttaaaatgaccgcccgtgagttaatggatatcagtgaagctcgtgaaaaatat
gcccgtgggcttgctatctcgctgactgacaggcaaattgatgaccagcttttgaaccgt
ctccgccaatcgttggaaccccaccgatcggggacgatcccagtacatctttattaccaa
cgggaagatgcgcgcgccagactacgatttggtgccacgtggcgtgttaccccgacagac
cgtttattgatcgacctgcggacgctggttggtaatgagcaggtggaactggaatttgac
taa
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